TCONS_00004110-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004110-protein
Unique NameTCONS_00004110-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1038

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004110-protein ID=TCONS_00004110-protein|Name=TCONS_00004110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1038bp
MASGMRLLVFSKFFLIFMFQRSILSFDCNDKTKKLQIHIVPHTHDDVGWL
KTVDQYFYGAERLIQAGSVQYILDTTIDELHKNPNRTFIYVEIAFFKRWW
DQQSDEKKDIVKKLVNNKQLEFISGGWSMNDEGATHYNGIIDQMTLGLLF
IEKHFGVEARPTVAWQIDPFGHSAEQASLFSLMSFDGLFFGRLDEADKKK
RKREQRMEMIWRGSRNYEKESQIFTGVLYNGYNPPPGFCYDEFCADPPIQ
DDDRLYDVNIKERVDAFVEVTCEQAEHYKTENIILTMGSDFQYENALRWF
INLDKLIKYVNEDGRVHAFYSTPSRYLKALHDSKKTWEVKKDDFFPYAHC
DHCYWTGYFTSRPTLKGYIRESNNVLQACKQIESLEEPNGNGATSERLKR
AVAVNQHHDAVTGTEKQPVAYDYAKRLHEGREDCKKLMSSHIKEKITDGS
KEPNQFNFTYCDYLNVSICHITEKEDSIVMNVYNPIARGIVTYARVPVKS
KEYIVFNANGDTVTSQLSHVSAQTTTVRHGSHGSAVYELTFEVKAPALGY
STYFIEKLGEVDFKGRAVYTQEQELKGDGTTIENEXGEVDFKGRAVYTQE
QELKGDGTTIENEALKLEFSEQTGHLVHMSRKDEGIEMDLEQQFFWYNAS
VGNEESIQTSGAYIFRPNKSQPLDVCELNKAAIYITKGPVYEEVRQVFGP
YVSQVVRLYKSADYAEFEHTVGPIPVADGWGKEIITRFDTSIDSSGKFYT
DANGREMKERIRDHRDTWKLNVTEPIAGNYYPVNSRIFIKDYNTQLTIMS
DRSQGGSSIYDGSIEIMVHRRLLRDDFLGVGEALNEPGLDGQGLISRGKH
RVLLSKPSTGARLHRDNGMLMMLAPMFSFSKNPYHMKKWKQSFTPTYSAL
KTPLPDNVHLLTMERIDHERIILRFENFFEKSERDEVAEINLDDLFKSFK
ITSVAEMNLSANQEISKKQMMDWQTEEPKESQSKINPPQPPGASNTIRLK
PMEIRTFIIKTHSEVESTSKRDDIPSQRYVDANGYVVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002288XLOC_002288Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004110TCONS_00004110Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015341Glyco_hydro_38_cen
IPR027291Glyco_hydro_38/57_N
IPR011682Glyco_hydro_38_C
IPR000602Glyco_hydro_38_N
IPR028995Glyco_hydro_57/38_cen
IPR011330Glyco_hydro/deAcase_b/a-brl
IPR011013Gal_mutarotase_SF_dom
Vocabulary: Biological Process
TermDefinition
GO:0006013mannose metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004559alpha-mannosidase activity
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006013 mannose metabolic process
molecular_function GO:0004559 alpha-mannosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015341Glycoside hydrolase family 38, central domainSMARTSM00872Alpha_mann_mid_2coord: 353..427
e-value: 4.2E-21
score: 86.1
IPR015341Glycoside hydrolase family 38, central domainGENE3D1.20.1270.50coord: 397..446
e-value: 3.0E-21
score: 74.4
IPR015341Glycoside hydrolase family 38, central domainPFAMPF09261Alpha-mann_midcoord: 354..427
e-value: 2.1E-20
score: 72.8
IPR015341Glycoside hydrolase family 38, central domainGENE3D1.20.1270.50coord: 317..395
e-value: 7.3E-30
score: 102.4
IPR027291Glycoside hydrolase 38/57, N-terminal domainGENE3D3.20.110.10coord: 35..316
e-value: 4.3E-100
score: 334.1
NoneNo IPR availableGENE3D2.70.98.30coord: 606..874
e-value: 2.9E-100
score: 334.1
NoneNo IPR availableGENE3D2.60.40.1180coord: 460..559
e-value: 7.2E-22
score: 77.1
NoneNo IPR availableGENE3D2.60.40.1360coord: 894..1014
e-value: 2.6E-31
score: 107.8
NoneNo IPR availableCDDcd10810GH38N_AMII_LAM_likecoord: 35..311
e-value: 0.0
score: 529.477
IPR011682Glycosyl hydrolase family 38, C-terminalPFAMPF07748Glyco_hydro_38Ccoord: 482..1008
e-value: 1.2E-85
score: 288.1
IPR000602Glycoside hydrolase family 38, N-terminal domainPFAMPF01074Glyco_hydro_38coord: 36..348
e-value: 2.5E-88
score: 296.1
IPR028995Glycoside hydrolase families 57/38, central domainSUPERFAMILY88688Families 57/38 glycoside transferase middle domaincoord: 352..443
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 30..349
IPR011013Galactose mutarotase-like domainSUPERFAMILY74650Galactose mutarotase-likecoord: 456..1010

Blast
[Close]
BLAST of TCONS_00004110-protein vs. Swiss-Prot (Human)
Match: MA2B1 (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 847.04 bits (2187), Expect = 0.000e+0
Identity = 456/993 (45.92%), Postives = 597/993 (60.12%), Query Frame = 0 
Query:   35 LQIHIVPHTHDDVGWLKTVDQYFYGAERLIQAGSVQYILDTTIDELHKNPNRTFIYVEIAFFKRWWDQQSDEKKDIVKKLVNNKQLEFISGGWSMNDEGATHYNGIIDQMTLGLLFIEKHFGVEARPTVAWQIDPFGHSAEQASLFSLMSFDGLFFGRLDEADKKKRKREQRMEMIWRGSRNYEKESQ-IFTGVLYNGYNPPPGFCYDEFCADPPIQDDDRLYDVNIKERVDAFVEVTCEQAEHYKTENIILTMGSDFQYENALRWFINLDKLIKYVN----EDGRVHAFYSTPSRYLKALHDSKKTWEVKKDDFFPYAHCDHCYWTGYFTSRPTLKGYIRESNNVLQACKQIESL------EEPNGNGATSERLKRAVAVNQHHDAVTGTEKQPVAYDYAKRLHEGREDCKKLMSSHIKEKITDGSKEPNQFNFTYCDYLNVSICHITEKEDSIVMNVYNPIARGIVTYARVPVKSKEYIVFNANGDTVTSQLSHVSAQTTTVRHGSHGSAVYELTFEVKAPALGYSTYFIEKLGEVDFKGRAVYTQEQELKGDGTTIENEXGEVDFKGRAVYTQEQELKGDGTTIENEALKLEFSEQTGHLVHMSRKDEGIEMDLEQQFFWYNASVGNEESIQTSGAYIFRPNKSQPLDVCELNKAAIYITKGPVYEEVRQVFGPYVSQVVRLYKSADYAEFEHTVGPIPVADGWGKEIITRFDTSIDSSGKFYTDANGREMKERIRDHRDTWKLNVTEPIAGNYYPVNSRIFIKDYNTQLTIMSDRSQGGSSIYDGSIEIMVHRRLLRDDFLGVGEALNEPGLDGQGLISRGKHRVLLSKPSTGARLHRDNGMLMMLAPMFSFSKNPYHMKKWKQSFTPTYSALKTPLPDNVHLLTMERIDHERIILRFENFF---EKSERDEVAEI--NLDDLFKSFKITSVAEMNLSANQEISKKQMMDWQTE---EPKESQSKINPPQPPGASNTIRLKPMEIRTFI 1008
            L +H++PHTHDDVGWLKTVDQYFYG +  IQ   VQYILD+ I  L  +P R FIYVEIAFF RWW QQ++  +++V+ LV   +LEF +GGW MNDE ATHY  I+DQMTLGL F+E  FG + RP VAW IDPFGHS EQASLF+ M FDG FFGRLD  DK  R ++  ME +WR S + +  +  +FTGVL NGYNPP   C+D  C D P+ +D R  + N KE VD F+ V   Q  +Y+T + ++TMGSDFQYENA  WF NLDKLI+ VN    +   VH  YSTP+ YL  L+ +  TW VK DDFFPYA   H +WTGYF+SRP LK Y R S N LQ C Q+E+L        P G+G  S  L  A+AV QHHDAV+GT +Q VA DYA++L  G   C+ L+S+ +      G K+    +FT+C  LN+SIC +++      + VYNP+ R +    R+PV    ++V + NG TV S +  +   + +  H        EL F    PALG+STY + ++    +K +A                          RA     +       TIENE ++  F   TG L+ +   ++ + + + Q FFWYNAS+G+ ES Q SGAYIFRPN+ +PL V     A I++ K P+ +EV Q F  + SQVVRLY    + E E +VGPIPV D WGKE+I+RFDT +++ G+FYTD+NGRE+ ER RD+R TWKLN TEP+AGNYYPVN+RI+I D N QLT+++DRSQGGSS+ DGS+E+MVHRRLL+DD  GV E L E   +G G   RG+H VLL      A  HR      +LAP    +                +S L+  LP +VHLLT+     E ++LR E+ F   E S R+  A +  NL DLF +F IT + E  L ANQ       + W T     P ++  +++P         I L+PMEIRTF+
Sbjct:   63 LNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISALLADPTRRFIYVEIAFFSRWWHQQTNATQEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGNDGRPRVAWHIDPFGHSREQASLFAQMGFDGFFFGRLDYQDKWVRMQKLEMEQVWRASTSLKPPTADLFTGVLPNGYNPPRNLCWDVLCVDQPLVEDPRSPEYNAKELVDYFLNVATAQGRYYRTNHTVMTMGSDFQYENANMWFKNLDKLIRLVNAQQAKGSSVHVLYSTPACYLWELNKANLTWSVKHDDFFPYADGPHQFWTGYFSSRPALKRYERLSYNFLQVCNQLEALVGLAANVGPYGSG-DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLAAGWGPCEVLLSNALAR--LRGFKD----HFTFCQQLNISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVV-IFPSSDSQAHPP------ELLFSASLPALGFSTYSVAQVPR--WKPQA--------------------------RAPQPIPRRSWSPALTIENEHIRATFDPDTGLLMEIMNMNQQLLLPVRQTFFWYNASIGDNESDQASGAYIFRPNQQKPLPVSRW--AQIHLVKTPLVQEVHQNFSAWCSQVVRLYPGQRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLME---NGSGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETTLVANQLREAASRLKWTTNTGPTPHQTPYQLDP-------ANITLEPMEIRTFL 1001
The following BLAST results are available for this feature:
BLAST of TCONS_00004110-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MA2B10.000e+045.92Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
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