TCONS_00004064-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004064-protein
Unique NameTCONS_00004064-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004064-protein ID=TCONS_00004064-protein|Name=TCONS_00004064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MSNEDSTIEKNLKLPVKKYHKTFDHNGIPFVMRWSIDDVAEWVTSELKFP
QYKDCFRNNYVSGKRLVQMTASNLPRMGITDFEHIKKITYEIRQLLGIEE
PNWNRSITLPPKDTVEHYLERKSVSGRNTDGLTFEEHVRYLEEFKKHGVP
EEEKHHWTETAEARKKVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002274XLOC_002274Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004064TCONS_00004064Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 31..98
e-value: 1.1E-11
score: 54.8
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 34..95
e-value: 1.9E-17
score: 63.3
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 34..98
score: 17.866
NoneNo IPR availableGENE3D1.10.150.50coord: 30..106
e-value: 1.3E-19
score: 69.7
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 31..97

Blast
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BLAST of TCONS_00004064-protein vs. Swiss-Prot (Human)
Match: SAM15 (Sterile alpha motif domain-containing protein 15 OS=Homo sapiens GN=SAMD15 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.192e-30
Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = 0 
Query:   15 PVKKYHKTFDHNGIPFVMRWSIDDVAEWVTSELKFPQYKDCFRNNYVSGKRLVQMTASNLPRMGITDFEHIKKITYEIRQLLGIEEPNWNRSITLPPKDTVEHYLERKSVSGRNTDGLTFEEHVR 139
            P K     F+H      + W  ++VAEW+ S+L FPQYK+CF  N++SG++L+ +  SNLP+MGIT+FE +K I+   ++LL IEEP + RSI+LP +D +  YLE+K  +G  +D LT  E V+
Sbjct:  532 PEKGTELQFEH------LNWDPEEVAEWI-SQLGFPQYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISRHTQELLEIEEPLFKRSISLPYRDIIGLYLEQKGHTGIKSDSLTLSEFVK 649
The following BLAST results are available for this feature:
BLAST of TCONS_00004064-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAM153.192e-3044.80Sterile alpha motif domain-containing protein 15 O... [more]
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