TCONS_00003604-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003604-protein
Unique Name	TCONS_00003604-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	344

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003604-protein ID=TCONS_00003604-protein|Name=TCONS_00003604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
KNKEFLSSKDIEKPEGFVPSVDIGKPDVMENDCGNQKIEGAEKVDGRPEK
KKSKSLNTGNKENDNILKAVRESTDPDSYPNKLPGYFLLINNENFLEMDK
RTGTDIDARSITVLFQDMGFTIEEHKDLLSYKMRQVLQEAGERSYAKYSC
LIICILSHGKEGEIYAVDETIPVKEITLCFHGSNLGGKPKIFLLQACQGR
AFMNTVQPREILASNRPPEDNDEPPPEDRNSEDLSEKLSSKEESSRIITL
PSEADFLYAYSTAFGFRSFRGPKSGTWFIQSFCEIVRKQALTMDVIRILT
RVNLMICSKQSKTKRQVVSVVTQLRKEFFLPIHLEKTAADSITC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002011	XLOC_002011	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003604	TCONS_00003604	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015917	Pept_C14A
IPR033139	Caspase_cys_AS
IPR001309	Pept_C14_p20
IPR002138	Pept_C14_p10
IPR029030	Caspase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0008234	cysteine-type peptidase activity
GO:0004197	cysteine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004197	cysteine-type endopeptidase activity
molecular_function	GO:0008234	cysteine-type peptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015917	Peptidase C14A, caspase catalytic domain	PRINTS	PR00376	IL1BCENZYME	coord: 151..159 score: 46.46 coord: 322..331 score: 27.58 coord: 268..279 score: 47.47 coord: 83..96 score: 36.8 coord: 101..119 score: 37.16 coord: 182..200 score: 49.28 coord: 119..137 score: 22.81
IPR015917	Peptidase C14A, caspase catalytic domain	SMART	SM00115	caspase_2	coord: 78..332 e-value: 7.4E-53 score: 191.6
None	No IPR available	GENE3D	3.40.50.1460		coord: 45..209 e-value: 8.8E-24 score: 83.7
None	No IPR available	PFAM	PF00656	Peptidase_C14	coord: 88..329 e-value: 2.4E-35 score: 122.6
None	No IPR available	GENE3D	3.30.70.1470		coord: 240..337 e-value: 5.4E-23 score: 80.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
IPR033139	Peptidase family C14A, cysteine active site	PROSITE	PS01122	CASPASE_CYS	coord: 188..199
IPR001309	Peptidase C14, p20 domain	PROSITE	PS50208	CASPASE_P20	coord: 85..201 score: 32.093
IPR002138	Peptidase C14, caspase non-catalytic subunit p10	PROSITE	PS50207	CASPASE_P10	coord: 246..330 score: 25.476
IPR029030	Caspase-like domain	SUPERFAMILY	52129	Caspase-like	coord: 83..331

Blast

[Close]

BLAST of TCONS_00003604-protein vs. Swiss-Prot (Human)
Match: CASP7 (Caspase-7 OS=Homo sapiens GN=CASP7 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.458e-40
Identity = 99/327 (30.28%), Postives = 155/327 (47.40%), Query Frame = 0

Query:   29 MENDCGNQKIEGAE------KVDGRPEKKK-SKSLNTGNKENDNI--LKAVRESTDPDSYPNKLP--GYFLLINNENF---LEMDKRTGTDIDARSITVLFQDMGFTIEEHKDLLSYKMRQVLQEAGERSYAKYSCLIICILSHGKEGEIYAVDETIPVKEITLCFHGS---NLGGKPKIFLLQACQGRAFMNTVQPREILASNRPPEDNDEPPPEDRNSEDLSEKLSSKEESSRIITLPSEADFLYAYSTAFGFRSFRGPKSGTWFIQSFCEIVRKQALTMDVIRILTRVNLMICSK--------QSKTKRQVVSVVTQLRKEFFL 330
            M +D G  + +G E       VD +P++     SL +  K+N  +  +K  R+      Y       G  ++INN+NF     M  R GTD DA ++   F+ +GF +  + D    KM+ +L++A E  +   +C    +LSHG+E  IY  D   P+K++T  F G     L  KPK+F +QAC+G    + +Q     A + P  D D  P                        +P EADFL+AYST  G+ S+R P  G+WF+Q+ C I+ +    +++++ILTRVN  +               K+Q+  VV+ L KE + 
Sbjct:    1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGIQ-----ADSGPINDTDANPR---------------------YKIPVEADFLFAYSTVPGYYSWRSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVVSMLTKELYF 301

The following BLAST results are available for this feature:

BLAST of TCONS_00003604-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003604-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CASP7	1.458e-40	30.28	Caspase-7 OS=Homo sapiens GN=CASP7 PE=1 SV=1	[more]

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TCONS_00003604-protein (polypeptide) - C. hemisphaerica