TCONS_00003598-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003598-protein
Unique NameTCONS_00003598-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003598-protein ID=TCONS_00003598-protein|Name=TCONS_00003598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
METLMNFTFQKALFVPKNLNQMRRCLCSIPGGSKRSVLTSKNDRPVGYTT
HWPSFTSPFHQKSPFQQPWFNSRNYNTNIINEYEVSCDELREDIANDEKM
YIIDVREPMEVEFDGKIPGSVLIPAGEIEDALRLPDEAFEKVYGYPKPPE
DGEDVVVYCAAGVRSLRATLLLRSLGYEETRSLAGGIKAWYETKSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002008XLOC_002008Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003598TCONS_00003598Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 86..196
e-value: 8.7E-21
score: 85.1
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 88..192
e-value: 1.4E-14
score: 54.4
IPR001763Rhodanese-like domainGENE3D3.40.250.10coord: 71..196
e-value: 2.9E-25
score: 88.0
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 96..195
score: 18.22
IPR001763Rhodanese-like domainSUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 79..193

Blast
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BLAST of TCONS_00003598-protein vs. Swiss-Prot (Human)
Match: TSTD1 (Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 OS=Homo sapiens GN=TSTD1 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.396e-19
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:   85 VSCDELREDIANDEKMYIIDVREPMEVEFDGKIPGSVLIPAGEIEDALRLPDEAFEKVYGYPKPPEDGEDVVVYCAAGVRSLRATLLLRSLGYEETRSLAGGIKAWYETKS 195
            VS  ELR  +A+  +  + DVR   E    G IPG++ IP  E+E AL++   AF+ +Y   KP  + E +V +C  G R L+AT L RSLGY   R+ AG  + W E +S
Sbjct:    7 VSLPELRSLLASG-RARLFDVRSREEAA-AGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES 115
The following BLAST results are available for this feature:
BLAST of TCONS_00003598-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSTD19.396e-1940.54Thiosulfate sulfurtransferase/rhodanese-like domai... [more]
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