Wnt3 (polypeptide) - C. hemisphaerica

Overview
NameWnt3
Unique NameTCONS_00003473-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length358

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003473-protein ID=TCONS_00003473-protein|Name=Wnt3|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
MARHWCVLVCFLLLMKNVNPMIWMHLGTQTSTISSKSIAKNFCNTLNLHP
FQRTVCNNFTDLIPSVAEGIRLSIEECQEQFQTRKWNCSIMAGGNSIFGP
MLQKASRESAFISGITAAGVAFSVTEACAEGRSLHCRCDNSIRGQTEEGW
KWGGCNRPISYGIWFSQLFIDMVEIKVKKRRDPRRAMNLHNNRAGREIIR
HNLWTKCKCHGMSGNCNLKTCWLAQPGFQQLGKMLKDRYDSAHEMDFEFK
IKKNGKKRFKKLIPRYKEYLPPSTLDFVYYEESPNYCENNNSLGIIGTRG
RECNITSAGVDGCDQMCCRRGFNVKIVQETKACDCKFIWCCHVKCKKCTE
AVPRYTCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001931XLOC_001931Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003473TCONS_00003473Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
IPR018161Wnt_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 107..121
score: 55.68
coord: 150..162
score: 51.32
coord: 276..287
score: 57.04
coord: 208..222
score: 73.72
coord: 126..139
score: 42.45
IPR005817WntSMARTSM00097wnt1_3coord: 44..358
e-value: 3.0E-131
score: 452.0
IPR005817WntPFAMPF00110wntcoord: 47..358
e-value: 1.4E-107
score: 359.7
IPR018161Wnt protein, conserved sitePROSITEPS00246WNT1coord: 207..216

Blast
[Close]
BLAST of Wnt3 vs. Swiss-Prot (Human)
Match: WNT3 (Proto-oncogene Wnt-3 OS=Homo sapiens GN=WNT3 PE=1 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 4.037e-109
Identity = 159/341 (46.63%), Postives = 216/341 (63.34%), Query Frame = 0 
Query:   20 PMIW-MHLGTQTSTISSKSIAKNFCNTL-NLHPFQRTVCNNFTDLIPSVAEGIRLSIEECQEQFQTRKWNCSIMAGGNSIFGPMLQKASRESAFISGITAAGVAFSVTEACAEGRSLHCRCDNSIRGQTEEGWKWGGCNRPISYGIWFSQLFIDMVEIKVKKRRDPRRAMNLHNNRAGREIIRHNLWTKCKCHGMSGNCNLKTCWLAQPGFQQLGKMLKDRYDSAHEMDFEFKIKKNGKKRFKKLIPRYKEYLPPSTLDFVYYEESPNYCENNNSLGIIGTRGRECNITSAGVDGCDQMCCRRGFNVKIVQETKACDCKFIWCCHVKCKKCTEAVPRYTCK 358
            P+ W + LG Q +++ S+ +    C ++  L P Q   C N+ +++PSVAEG++L I+ECQ QF+ R+WNC+ +    +IFGP+L KA+RESAF+  I +AGVAF+VT +CAEG S  C CD+  +G   EGWKWGGC+    +G+  S+ F D  E     R D R AMN HNN AGR  I  ++  KCKCHG+SG+C +KTCW AQP F+ +G  LKD+YDSA EM  E   +  G    + L  +Y  + PP+  D VYYE SPN+CE N   G  GTR R CN+TS G+DGCD +CC RG N +  +  + C C F WCC+V C++C      +TCK
Sbjct:   24 PIWWSLALGQQYTSLGSQPL---LCGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCTTIDDSLAIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHKGPPGEGWKWGGCSEDADFGVLVSREFADARE----NRPDARSAMNKHNNEAGRTTILDHMHLKCKCHGLSGSCEVKTCWWAQPDFRAIGDFLKDKYDSASEMVVEKHRESRG--WVETLRAKYSLFKPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECIRIYDVHTCK 355
The following BLAST results are available for this feature:
BLAST of Wnt3 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT34.037e-10946.63Proto-oncogene Wnt-3 OS=Homo sapiens GN=WNT3 PE=1 ... [more]
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