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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003447-protein ID=TCONS_00003447-protein|Name=TCONS_00003447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=529bp
MTNTENSTTTSESLITCNAASSPVKPVEPLPPKPHDEVIMDSCGLLPPSS
ENSNLDDIDEDNEGSDQGSSDSALPLSSASNTNNDSSNEENERSNEKKRK
DILHRDIEKRRRERINRSLVKLKSLVPTTRDSMKCNGNSRLQKAKLLEMT
VEYLENISKKEPSQLSKDCKSENKRGNESPNRDVVVESAKEIYLTGYKAA
TEHIIKKISDVYNISGNELQSLTKVIGIPEDVKVPNMVLVPPSPSPLANG
EKKMVDLNDAMAAQKEKLKREKVNAMTVASQYGLNYTNGSLKEEISMKHS
PPLRNGQNAFSFSDHHHQEQKMKSEHEKETDTPGPILLSCLMQDPMTSQY
HTTVLPLTAIMSAEKCRNLSMPYLYKQSKNAIETVLSKRKDVPPLTSPKA
SPNFFMPPHKADEYAHALASSPLKRLHDDRQVPVIIGGKRPPQLTKEYDR
SKEYERMNGHMNGYPDPRGPTPDRNRLPSTENSFMERKQRYDINANMEMV
KDFDLKYKLRNEDYLRGLPTSNGKDKFWY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011598 | bHLH_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046983 |
protein dimerization activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 247..274 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..107 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 161..182 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 298..332 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 458..481 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | SMART | SM00353 | finulus | coord: 105..163
e-value: 5.1E-8
score: 42.6 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | PFAM | PF00010 | HLH | coord: 104..155
e-value: 1.6E-10
score: 40.7 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | GENE3D | 4.10.280.10 | | coord: 92..329
e-value: 5.0E-13
score: 48.3 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | PROSITE | PS50888 | BHLH | coord: 99..157
score: 14.068 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | CDD | cd00083 | HLH | coord: 104..161
e-value: 4.00382E-9
score: 52.2163 |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | SUPERFAMILY | 47459 | HLH, helix-loop-helix DNA-binding domain | coord: 97..160 |
Blast
The following BLAST results are available for this feature:
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