TCONS_00003395-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003395-protein
Unique NameTCONS_00003395-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003395-protein ID=TCONS_00003395-protein|Name=TCONS_00003395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MACQTLQTLSVLERRGFTLPEISISPEDFNGNLCETKDMKQLDEILCYLT
SPLGITKSMVKLTKEDASEPSLATPKILTEDKFEKYLTDITMESPTIKRK
QNNTVLSPLPRFSNQKSREQMNSQQETSIPLFPSKSADSITPNTSFVVGR
LTEDNEDEFNIYFPDSSNTNTQTHIGQYNSIFQFPDSPNLAFENKENGGK
KNDFRSKDSPDSEFKIQKSKKNQNIIERRRRVEQHQRFQKLASSIPYITN
KKTLPKIMILRAAKQYLEILHREEQDLLEVKSSEKQKNQFLLNRLASLSS
L
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001890XLOC_001890Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003395TCONS_00003395Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 224..276
e-value: 1.4E-7
score: 41.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 220..268
e-value: 4.6E-8
score: 32.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 204..285
e-value: 1.1E-9
score: 37.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 218..270
score: 11.636
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 218..275
e-value: 1.29797E-9
score: 52.2163
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 219..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..220

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003395-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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