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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003254-protein ID=TCONS_00003254-protein|Name=TCONS_00003254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
EKTWSCHHFQVDDLYMKGEATKKTDKDSEKKQQQRNPATNQQLGSNESGA
GSSDTEKTSSSFFKTNTVSGNLNRLKELPSFHSGYASLDEFLYAASSDNN
GNRPTSSSSGGITSQVKLTQNKTAQKRQSRGERTKSSNMQMISSSSQNNN
GATTISKAASQAKQSNKNKRQAQAAIDEMNRQYDHNLCLDRFINDIEQQQ
NEKKSEKEVKRDLNTSPSXSTQNNNGATTISKAASQAKQSNKNKRQAQAA
IDEMNRQYDHNLCLDRFINDIEQQQNEKKSEKEVKRDLNTSPSNSSLSSS
SSNMPQSNEDTDSGSRNSESIQSSENAKNKKYSNTNSSNSSNNGSGKEDK
TVNTDKEFPKSSGSEQNGEHSKTFSSMESSGIGSVMTGETCESMDTSEGN
QEEKIKNYKGGKLGRKRKRGYIYNPKPVIEKPPKQFVPDQEKDQSYWDKR
QRNNEAARRSREMRRVKEKETHDKLDRLKKENEALRVAITLLIQRNXRER
SVTCCHHTLDSEK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 189..216 |
| None | No IPR available | COILS | Coil | Coil | coord: 468..495 |
| None | No IPR available | COILS | Coil | Coil | coord: 230..257 |
| None | No IPR available | COILS | Coil | Coil | coord: 264..291 |
| None | No IPR available | COILS | Coil | Coil | coord: 155..182 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 432..508
e-value: 8.1E-8
score: 31.6 |
| None | No IPR available | GENE3D | 1.10.238.10 | | coord: 23..220
e-value: 0.099
score: 12.1 |
| None | No IPR available | CDD | cd14695 | bZIP_HLF | coord: 442..500
e-value: 7.85406E-14
score: 65.6513 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 441..501 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 441..498
e-value: 0.0012
score: 28.1 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF07716 | bZIP_2 | coord: 442..491
e-value: 1.3E-12
score: 47.4 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 443..492
score: 9.668 |
Blast
The following BLAST results are available for this feature:
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