TCONS_00002841-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002841-protein
Unique NameTCONS_00002841-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length504

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002841-protein ID=TCONS_00002841-protein|Name=TCONS_00002841-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
WRTQISFCQAWRKDSLKFIVEKMSEKQKKNYKKTPEQLEILQSYYDQGMT
NYRTDNLEARSLLSEAVIKTSLSESQVKHWIDSKKKKPTEKVKIRTRKAR
GVDIFKSEYMQDAKKNEEMYNPNEALTRATIEWNLLSSDEKENYNSRAVD
IIPPKFDELSAEAQKVKISMTRRKIIALCKEMESYGVDLLVLEADKERRG
KNITAYGSEKAYDFWDNHDDLEWEFSCFMNGVSTKENRPLLSERKEVANL
LNNRFRCMKIATRSTVPYKQISEGLFEVRGLPNGFYFKKPSACAIWELDL
LKQHMDDITFMKCRPANVSSNVPSSDATENVSSIVSSIVSSNVSSNASSN
ERTSNNHQVQTSELTSITFEVLDETSESNFNLAPDSNLNKRKRKYKTRNK
PEAKKNKENEYQQQEPFDDYFLNLLPDEQVPNNGGWKVTKKELLEKASNG
DYMVETINKHRETSAGMEYLVRWVGYKNETWEKAENIPVDDIEYYGKRTN
FNGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001549XLOC_001549Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002841TCONS_00002841Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR004212GTF2I
IPR001356Homeobox_dom
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 451..500
e-value: 9.8E-7
score: 38.4
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 452..487
score: 11.128
IPR004212GTF2I-like repeatPFAMPF02946GTF2Icoord: 244..310
e-value: 9.1E-6
score: 25.5
IPR004212GTF2I-like repeatGENE3D3.90.1460.10coord: 242..319
e-value: 5.1E-7
score: 29.1
IPR004212GTF2I-like repeatPROSITEPS51139GTF2Icoord: 234..325
score: 9.307
IPR004212GTF2I-like repeatSUPERFAMILY117773GTF2I-like repeatcoord: 244..320
NoneNo IPR availableGENE3D2.40.50.40coord: 381..502
e-value: 1.9E-9
score: 37.1
NoneNo IPR availableGENE3D1.10.10.60coord: 21..97
e-value: 1.2E-4
score: 21.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..413
NoneNo IPR availableCDDcd00024CHROMOcoord: 450..487
e-value: 4.03787E-4
score: 37.2435
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 24..91
score: 9.426
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 450..497

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002841-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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