TCONS_00002835-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002835-protein
Unique Name	TCONS_00002835-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	819

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002835-protein ID=TCONS_00002835-protein|Name=TCONS_00002835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=819bp
FQCAMMPQKTMKKSLSIADKVSSLNAVEGSINSPLHRFVRAKKKINQSFD
EILDYLKESRRFLIDCEISNQYDGETKRDLKKVDNYLTQVVGIHEVLKRD
HMKVAFFGRTSNGKSTVINAMLSERILPAGIGHTTNCFLSVNGADGNDAY
IEDTSKNPPERNSVESLQQLAHALHNQKLDSSSHLKVYWPTTKCPLLKDD
VVFVDSPGVDVTPDLDTWIDTHCLDADVFVLVVNSESTINHTEKSFFHKV
NSKLSKPNIFILNNRWDASAEGDPEMIKLVKQQHMERTSEFLVKELKCVS
QAESADRIFFVSALETLRHRMSMKRSKMPQREPSIDENSDFDEAAYRMGK
MARRQEFEDFENKFKECISKSAITTKFNGHTSTGITIAKEMVQIMEQILA
RASSHRSWCTAERQEQQETLDFINSKLEEVTEQIKNKIQNITEEVEMQVT
KAMSDEIRRLGTLVGEFDYPFHPHSGFLRNYKKELHAYIEKGLGKNLKAR
CSQPLIESIDSYKSEMQDQIYSLIPTSACTSTITMSPRTNFAVSYELEVE
NLCSDFHEDITFKFTLGWTSLVNKFIAPRNPRLAMLLGAAVKQNMYYEPL
KERRSLRTIPSEAKSIHMEEEDSEVVQSRYVRQESTNEEMIQTLSRQEED
QLTIAVIQGLSSLGSSTAMGLVVAGSLVWRTVGWKIIAGSAACYLAVYTY
EKAMWTNAAKEKSFKKQFVEYASEKLQMVVSFTSKGCSHQIQQELSSTFA
QLASMVDSAKAKVKSRIEELDEEIQTLKELETKAKLFKNKASWLENDFNA
FTKEFNLTPAVLNTQDSKL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001546	XLOC_001546	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002835	TCONS_00002835	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022812	Dynamin_SF
IPR006884	Fzo/mitofusin_HR2
IPR030381	G_DYNAMIN_dom
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0005741	mitochondrial outer membrane
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0008053	mitochondrial fusion

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008053	mitochondrial fusion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005741	mitochondrial outer membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 760..797
None	No IPR available	COILS	Coil	Coil	coord: 413..447
None	No IPR available	GENE3D	3.40.50.300		coord: 41..450 e-value: 4.6E-28 score: 97.8
None	No IPR available	GENE3D	1.20.5.110		coord: 746..807 e-value: 1.2E-8 score: 34.4
None	No IPR available	CDD	cd09912	DLP_2	coord: 102..368 e-value: 2.99566E-36 score: 134.596
None	No IPR available	SUPERFAMILY	111479	Fzo-like conserved region	coord: 746..805
IPR022812	Dynamin superfamily	PFAM	PF00350	Dynamin_N	coord: 104..264 e-value: 1.9E-23 score: 83.3
IPR006884	Fzo/mitofusin HR2 domain	PFAM	PF04799	Fzo_mitofusin	coord: 649..805 e-value: 3.0E-57 score: 192.5
IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	PROSITE	PS51718	G_DYNAMIN_2	coord: 98..345 score: 44.918
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 78..308

Blast

[Close]

BLAST of TCONS_00002835-protein vs. Swiss-Prot (Human)
Match: MFN2 (Mitofusin-2 OS=Homo sapiens GN=MFN2 PE=1 SV=3)

HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0
Identity = 359/780 (46.03%), Postives = 507/780 (65.00%), Query Frame = 0

Query:   33 SPLHRFVRAKKKINQSFDEILDYLKESRRFLIDCEISNQYDG-ETKRDLKKVDNYLTQVVGIHEVLKRDHMKVAFFGRTSNGKSTVINAMLSERILPAGIGHTTNCFLSVNGADGNDAYIEDTSKNPPERNSVESLQQLAHALHNQK-LDSSSHLKVYWPTTKCPLLKDDVVFVDSPGVDVTPDLDTWIDTHCLDADVFVLVVNSESTINHTEKSFFHKVNSKLSKPNIFILNNRWDASAEGDPEMIKLVKQQHMERTSEFLVKELKCVSQAESADRIFFVSALETLRHRMSMKRSKMPQREPSIDENSDFDEAAYRMGKMARRQEFEDFENKFKECISKSAITTKFNGHTSTGITIAKEMVQIMEQILARASSHRSWCTAERQEQQETLDFINSKLEEVTEQIKNKIQNITEEVEMQVTKAMSDEIRRLGTLVGEFDYPFHPHSGFLRNYKKELHAYIEKGLGKNLKARCSQPLIESIDSYKSEMQDQIYSLIPTSACTSTITMSPRTNFAVSYELEVENLCSDFHEDITFKFTLGWTSLVNKFIAPRNPRLAMLLGAAVKQNMYYEPLKERRSLRTIPSEAKSIHMEEEDSEVVQSRYVRQESTNEEMIQTLSRQEEDQLTIAVIQGLSSLGSSTAMGLVVAGSLVWRTVGWKIIAGSAACYLAVYTYEKAMWTNAAKEKSFKKQFVEYASEKLQMVVSFTSKGCSHQIQQELSSTFAQLASMVDSAKAKVKSRIEELDEEIQTLKELETKAKLFKNKASWLENDFNAFTKEFNLTPA 810
            SPL  FV AKKKIN  F+++  Y++ES  FL D   + + D   T+  +  V  YL++V GI EVL R HMKVAFFGRTSNGKSTVINAML +++LP+GIGHTTNCFL V G DG++A++   ++   E+ S +++ QLAHALH  K L + S + V WP +KCPLLKDD+V +DSPG+DVT +LD+WID  CLDADVFVLV NSEST+  TEK FFHKV+ +LS+PNIFILNNRWDASA  +PE ++ V++QHMER + FLV EL  V ++++ DRIFFVSA E L  R+  K   MP+   ++ E           G   R  EF++FE +F+ECIS+SA+ TKF  HT     IA+ +  IM+ +   A   + +C   R+E+Q+ L FI+ +LE + +  K +I+ ITEEVE QV+ AM++EIRRL  LV ++   FHP    L+ YK ELH +IE+GLG+N+  RCS  +  S+ + + +M D +  L+P S  +    + PR  F+++Y+L  + LC+DF EDI F F+LGWT LVN+F+ P+N R A L+G       Y + ++     R IP    +  M            + Q S  +E           +  ++++ GL+SL S T+MG++V G +VW+ VGW++IA S   Y  +Y YE+  WT  AKE++FK+QFVE+ASEKLQ+V+S+T   CSHQ+QQELS TFA L   VD  +  ++  I  ++++I+ L  L++KAKL +NKA WL+++ N FT ++ L P+
Sbjct:   27 SPLKHFVTAKKKINGIFEQLGAYIQESATFLEDTYRNAELDPVTTEEQVLDVKGYLSKVRGISEVLARRHMKVAFFGRTSNGKSTVINAMLWDKVLPSGIGHTTNCFLRVEGTDGHEAFL--LTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNSKCPLLKDDLVLMDSPGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSERLSRPNIFILNNRWDASA-SEPEYMEEVRRQHMERCTSFLVDELGVVDRSQAGDRIFFVSAKEVLNARIQ-KAQGMPEGGGALAE-----------GFQVRMFEFQNFERRFEECISQSAVKTKFEQHTVRAKQIAEAVRLIMDSLHMAAREQQVYCEEMREERQDRLKFIDKQLELLAQDYKLRIKQITEEVERQVSTAMAEEIRRLSVLVDDYQMDFHPSPVVLKVYKNELHRHIEEGLGRNMSDRCSTAITNSLQTMQQDMIDGLKPLLPVSVRSQIDMLVPRQCFSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRFLGPKNSRRA-LMG-------YNDQVQ-----RPIPLTPANPSMPP----------LPQGSLTQE-----------EFMVSMVTGLASLTSRTSMGILVVGGVVWKAVGWRLIALSFGLYGLLYVYERLTWTTKAKERAFKRQFVEHASEKLQLVISYTGSNCSHQVQQELSGTFAHLCQQVDVTRENLEQEIAAMNKKIEVLDSLQSKAKLLRNKAGWLDSELNMFTHQY-LQPS 756

The following BLAST results are available for this feature:

BLAST of TCONS_00002835-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002835-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFN2	0.000e+0	46.03	Mitofusin-2 OS=Homo sapiens GN=MFN2 PE=1 SV=3	[more]

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TCONS_00002835-protein (polypeptide) - C. hemisphaerica