TCONS_00002827-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002827-protein
Unique Name	TCONS_00002827-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	430

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002827-protein ID=TCONS_00002827-protein|Name=TCONS_00002827-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
MVDDKSTGKVKAVILVAGPQKGTRFRPLSLEVPKPLFPVAGKPLLEHHIS
SCCKLPDLEEIIILGFYQSNDTILRFIDDMKRQYKTSIRYLQEYQPLGTA
GGLYHFRDQIVTASTKAIVVIHADIFCVLPLKKMMEMFSSKNENNAGSHI
VLGTQVHQTSSNHSEHGNIVLDNNTFEVNHYVEKPESFVSAIINCGTYVF
HPSVVESLGEVYRNTRDDGEQTSNRELLFFGKHLFTKMAGRGKLFCHLLK
ESFWGSMKSAGSAIYANRRYLDSYKTNEGQQLVQNEPGKPEIVGDVFIHP
TATVHPTAKLGPNVSIGSNCVIGPGARVKESIILDGADLRENCCVLYSII
GWRCLVGAWSRIEGTPHEPNPNFAHALVTNESLFHADGHLIPSVTVLGCN
VIIPREVIVLNCIVLPHKELSGSYKNQIIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001542	XLOC_001542	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002827	TCONS_00002827	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001451	Hexapep
IPR029044	Nucleotide-diphossugar_trans
IPR005835	NTP_transferase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016779	nucleotidyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0016779	nucleotidyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001451	Hexapeptide repeat	PFAM	PF00132	Hexapep	coord: 295..329 e-value: 2.8E-8 score: 33.1
None	No IPR available	GENE3D	2.160.10.10		coord: 274..427 e-value: 1.1E-22 score: 79.6
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 2..273 e-value: 2.0E-49 score: 167.7
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 10..353
IPR005835	Nucleotidyl transferase domain	PFAM	PF00483	NTP_transferase	coord: 11..213 e-value: 6.8E-27 score: 94.5

Blast

[Close]

BLAST of TCONS_00002827-protein vs. Swiss-Prot (Human)
Match: GMPPA (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 433.721 bits (1114), Expect = 1.221e-150
Identity = 208/427 (48.71%), Postives = 299/427 (70.02%), Query Frame = 0

Query:   10 VKAVILVAGPQKGTRFRPLSLEVPKPLFPVAGKPLLEHHISSCCKLPDLEEIIILGFYQSNDTILRFIDDMKRQYKTSIRYLQEYQPLGTAGGLYHFRDQIVTASTKAIVVIHADIFCVLPLKKMMEMFSSKNENNAGSHIVLGTQVHQTSSNHSEHGNIVLDNNTFEVNHYVEKPESFVSAIINCGTYVFHPSVVESLGEVYRNTRDDGEQTSNREL------LFFGKHLFTKMAGRGKLFCHLLKESFWGSMKSAGSAIYANRRYLDSYKTNEGQQLVQNEPGKPEIVGDVFIHPTATVHPTAKLGPNVSIGSNCVIGPGARVKESIILDGADLRENCCVLYSIIGWRCLVGAWSRIEGTPHEPNPNFAHALVTNESLFHADGHLIPSVTVLGCNVIIPREVIVLNCIVLPHKELSGSYKNQIIL 430
            +KAVIL+ GPQKGTRFRPLS EVPKPLFPVAG P+++HHI +C ++P ++EI+++GFYQ ++ + +F++  ++++   +RYLQE+ PLGT GGLYHFRDQI+  S +A  V++AD+    PL  M+E    +        ++LGT  ++T S +  +G IV +  T EV HYVEKP +F+S IINCG Y+F P  ++ L +V++  + DG+   +  L      +   + +F+ +AG+G+++ H L +  W  +KSAGSA+YA+R YL  Y+    ++L ++ PG P I G+V+IHPTA V P+A LGPNVSIG    +G G R++ESI+L GA L+E+ CVL+SI+GW   VG W+R+EGTP +PNPN   A + +ESLF  DG L+P++T+LGC V IP EV++LN IVLPHKELS S+ NQIIL
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRH----PFLLLGTTANRTQSLN--YGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEDSPGLWPGAGTIRLEQDVFSALAGQGQIYVH-LTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLF-KDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL 420

The following BLAST results are available for this feature:

BLAST of TCONS_00002827-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002827-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GMPPA	1.221e-150	48.71	Mannose-1-phosphate guanyltransferase alpha OS=Hom...	[more]

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TCONS_00002827-protein (polypeptide) - C. hemisphaerica