TCONS_00002807-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002807-protein
Unique NameTCONS_00002807-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length507

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002807-protein ID=TCONS_00002807-protein|Name=TCONS_00002807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=507bp
MGAGSSSEVPGGGSEGYHVLRVQEGSPGYKAGLEPFFDFIISVEDRRLDQ
DDDTLKEVLKTNVEKPCKLLVYSSKTRKVRESSITPSNLWGGQGLLGVSI
RFCSFDGASDNVWHVLDVNPNSPADIAGLRPHTDYVIGADQVLHDTEDFF
NLIEQHEGKALKLYVYNAETDGCREVTITPNGNWGGEGSIGCGIGYGLLH
RIPVPDQTVPLKPPMVAPSTAGIGGFSEIPLQGGSVPLHAGSLDGQMAAM
NLSSTNSFQQPPPPMTAPLLTNNLPPNNFPPTQPTSFTPQPPMQPTNFVP
QQHMQPTNFATQPPMQATNYSPQPAIPPTNFTPQSMTPPPSLQQSQTTPP
AASQIPSAVVPPQQNISPMQPPPQLQPNLPTIMSTSTVGSYQPATLVATE
SAPLHTTPTQPTINGYQANPPINSGETAFIQPQYQTQPMQPAHPPSQLFA
APPQLQTIPSQYQQDPNVILAKTTPSMTDISLDGSPQMIQHIPSQLPAES
EQNVNLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001532XLOC_001532Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002807TCONS_00002807Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024958GRASP55/65_PDZ
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024958GRASP55/65 PDZ-like domainPFAMPF04495GRASP55_65coord: 69..204
e-value: 8.0E-54
score: 181.6
NoneNo IPR availableGENE3D2.30.42.10coord: 15..110
e-value: 1.9E-16
score: 59.8
coord: 111..208
e-value: 1.2E-17
score: 63.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..381
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 12..77
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 94..180

Blast
[Close]
BLAST of TCONS_00002807-protein vs. Swiss-Prot (Human)
Match: GORS2 (Golgi reassembly-stacking protein 2 OS=Homo sapiens GN=GORASP2 PE=1 SV=3)

HSP 1 Score: 347.436 bits (890), Expect = 3.482e-115
Identity = 173/310 (55.81%), Postives = 221/310 (71.29%), Query Frame = 0 
Query:    1 MGAGSSSEVPGGGSEGYHVLRVQEGSPGYKAGLEPFFDFIISVEDRRLDQDDDTLKEVLKTNVEKPCKLLVYSSKTRKVRESSITPSNLWGGQGLLGVSIRFCSFDGASDNVWHVLDVNPNSPADIAGLRPHTDYVIGADQVLHDTEDFFNLIEQHEGKALKLYVYNAETDGCREVTITPNGNWGGEGSIGCGIGYGLLHRIPV----PDQTVPLKPPMVA-PSTAGIGGFSEIPLQGGSVPLHA----GSLDGQMAAMNLSSTNSFQQPPPPMTAPLLTNNLPPN-NFPPTQPTSFTPQPPMQPTNFVP 300
            MG+  S E+PGGG+EGYHVLRVQE SPG++AGLEPFFDFI+S+   RL++D+DTLK++LK NVEKP K+L+YSSKT ++RE+S+TPSNLWGGQGLLGVSIRFCSFDGA++NVWHVL+V  NSPA +AGLRPH+DY+IGAD V++++ED F+LIE HE K LKLYVYN +TD CREV ITPN  WGGEGS+GCGIGYG LHRIP       + + L   M   P T    GF+E+ L   + P  +      ++  +  +++SST       PP  + +L+  +P     PP    S T  PPM P   +P
Sbjct:    1 MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGIEQSLTGLSISST-------PPAVSSVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLP 303
The following BLAST results are available for this feature:
BLAST of TCONS_00002807-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GORS23.482e-11555.81Golgi reassembly-stacking protein 2 OS=Homo sapien... [more]
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