TCONS_00002700-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002700-protein
Unique NameTCONS_00002700-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002700-protein ID=TCONS_00002700-protein|Name=TCONS_00002700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
HDFHFHLCILDEFICGENYTKCHEKALCILDDENSSCQCKQGYIGNGESC
KINEINECKLNLHTCHANATCIDTHEHYQCSCKDGFIGNGTICEDFDECK
AEVAHCPTNSTCVNLIGSFDCFCNSGYQKCENTCKDVDECSDPDLNRCHA
KAKCENTIGSYMCFCQKGYSGDGYQCGDLNECSNNSMNNCHQNALCLNTE
GSYQCYCQKGFYGNGRKCFDFNECYSPTTHNCHQHSNCVNNIGSYTCQCR
NGFIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001459XLOC_001459Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002700TCONS_00002700Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR024731EGF_dom
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR018097EGF_Ca-bd_CS
IPR013032EGF-like_CS
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 54..94
e-value: 2.1E-7
score: 40.6
coord: 178..219
e-value: 6.7E-9
score: 45.6
coord: 136..177
e-value: 1.1E-7
score: 41.6
coord: 95..135
e-value: 6.9E-7
score: 38.9
coord: 220..255
e-value: 6.3E-4
score: 27.6
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 220..253
e-value: 3.7E-10
score: 39.7
coord: 136..176
e-value: 1.6E-10
score: 40.9
coord: 95..134
e-value: 2.3E-9
score: 37.2
coord: 178..218
e-value: 2.2E-9
score: 37.2
IPR000742EGF-like domainSMARTSM00181egf_5coord: 98..135
e-value: 3.7
score: 16.5
coord: 57..94
e-value: 1.2E-5
score: 34.8
coord: 181..219
e-value: 6.8E-4
score: 28.9
coord: 14..51
e-value: 8.8
score: 15.3
coord: 139..177
e-value: 0.036
score: 23.2
coord: 223..255
e-value: 49.0
score: 8.1
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 136..177
score: 15.327
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 178..219
score: 15.052
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 95..131
score: 11.703
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 54..94
score: 15.992
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 11..51
score: 8.201
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 220..255
score: 8.543
NoneNo IPR availableGENE3D2.10.25.10coord: 19..58
e-value: 3.3E-9
score: 36.5
NoneNo IPR availableGENE3D2.10.25.10coord: 138..159
e-value: 7.9E-11
score: 41.2
NoneNo IPR availableGENE3D2.10.25.10coord: 222..255
e-value: 9.7E-10
score: 37.9
NoneNo IPR availableGENE3D2.40.155.10coord: 78..99
e-value: 8.7E-12
score: 44.5
coord: 160..180
e-value: 2.3E-12
score: 46.4
NoneNo IPR availableGENE3D2.10.25.10coord: 181..203
e-value: 1.6E-9
score: 37.2
coord: 59..77
e-value: 3.8E-8
score: 32.8
NoneNo IPR availableGENE3D2.10.25.10coord: 204..221
e-value: 2.0E-9
score: 36.7
coord: 120..137
e-value: 3.8E-9
score: 35.8
NoneNo IPR availableGENE3D2.10.25.10coord: 100..119
e-value: 1.7E-8
score: 34.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 178..213
e-value: 8.96695E-4
score: 34.9198
NoneNo IPR availableCDDcd00054EGF_CAcoord: 220..254
e-value: 0.00374655
score: 32.9938
NoneNo IPR availableCDDcd00054EGF_CAcoord: 55..88
e-value: 0.00489518
score: 32.6086
NoneNo IPR availableCDDcd00054EGF_CAcoord: 136..172
e-value: 0.00122015
score: 34.5346
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 213..254
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 136..175
IPR024731EGF domainPFAMPF12947EGF_3coord: 58..93
e-value: 2.3E-9
score: 37.2
coord: 15..50
e-value: 3.0E-7
score: 30.4
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 154..165
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 71..82
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 112..123
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 238..249
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 196..207
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 220..247
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 136..163
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 205..218
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 80..93
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 163..176
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 37..50
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 164..219
coord: 55..136

Blast
[Close]
BLAST of TCONS_00002700-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 4.607e-40
Identity = 85/227 (37.44%), Postives = 112/227 (49.34%), Query Frame = 0 
Query:   37 CQCKQGYI--GNGESCKINEINECKLNLHTCHANATCIDTHEHYQC--SCKDGF--IGNGTICEDFDECKAEVAHCPTNSTCVNLIGSFDCFCNSGYQKCENTCKDVDECSDPDLNRCHAKAKCENTIGSYMC--FCQKGYS-GDGYQCGDLNECSNNSMNNCHQNALCLNTEGSYQCYCQKGF--YGNGRKCFDFNECYSPTTHNCHQHSNCVNNIGSYTCQCRNG 252
            C C +G     +G +C+  +I+EC L  HTCHA   C +T   Y+C   C  GF    +G  C+D +EC+      P +  C N IGSF C C  GYQ     C DV+EC     N C     C+NT G Y C   C  G +  +   C D++EC + + + C  N +C NT GSY+C C +G+   G GR C D NEC        HQ   C N  GS+ C C  G
Sbjct: 5130 CSCPKGLTIAADGRTCQ--DIDECALGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINECQES---SPCHQRCFNAIGSFHCGCEPGYQLKGRKCMDVNECRQ---NVCRPDQHCKNTRGGYKCIDLCPNGMTKAENGTCIDIDECKDGT-HQCRYNQICENTRGSYRCVCPRGYRSQGVGRPCMDINECEQVPKPCAHQ---CSNTPGSFKCICPPG 5344

HSP 2 Score: 123.635 bits (309), Expect = 5.560e-32
Identity = 77/230 (33.48%), Postives = 107/230 (46.52%), Query Frame = 0 
Query:   34 NSSCQCKQGYIGNGESCKINEINECKLNLHTCHANATCIDTHEHYQCSCKDGFI--GNGTICEDFDECKAEVAHCPTNSTCVNLIGSFDCF--CNSGYQKCEN--TCKDVDECSDPDLNRCHAKAKCENTIGSYMCFCQKGYSGDGYQCGDLNECSNNSMNNCHQNALCLNTEGSYQC--YCQKGFYG--NGRKCFDFNECYSPTTHNCHQHSNCVNNIGSYTCQCRNGF 253
            + S QC  G+  +       + +EC       H   +C +    Y CSC  G     +G  C+D DEC      C     C N IGS+ C   C SG+++  +  +C+D++EC +   + CH +  C N IGS+ C C+ GY   G +C D+NEC  N    C  +  C NT G Y+C   C  G     NG  C D +EC    TH C  +  C N  GSY C C  G+
Sbjct: 5087 DRSNQCPSGFTLDSVGPFCADEDECAAGNPCSH---SCHNAMGTYYCSCPKGLTIAADGRTCQDIDECALGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINECQES--SPCHQR--CFNAIGSFHCGCEPGYQLKGRKCMDVNECRQNV---CRPDQHCKNTRGGYKCIDLCPNGMTKAENG-TCIDIDEC-KDGTHQCRYNQICENTRGSYRCVCPRGY 5304

HSP 3 Score: 95.9005 bits (237), Expect = 2.592e-22
Identity = 85/281 (30.25%), Postives = 112/281 (39.86%), Query Frame = 0 
Query:   15 CGENYTKCHEKALCILDDENSSCQCKQGYIGNGESCKINEINECKLNLHTCHANATCIDTHEHYQCS--CKDGFIG--NGTICEDFDECKAEVAHCPTNSTCVNLIGSFDCFCNSGY--QKCENTCKDVDECSDPDLNRCHAKAKCENTIGSYMCFCQKGYS--GDGYQCGDLNECSN-----NSMNNCHQNALCLNTE------------GSYQCY-----------------CQKGFYGNGRKCFDFNECYSPTTHNCHQHSNCVNNIGSYTCQCRNGF 253
            C E+ + CH++  C     +  C C+ GY   G  C   ++NEC+ N+  C  +  C +T   Y+C   C +G     NGT C D DECK     C  N  C N  GS+ C C  GY  Q     C D++EC        H   +C NT GS+ C C  G    GDG  C  L    N     +S N    + +  N +             SY  Y                 C +G   +   C D +EC    T  C QH  C N  GSY C C  G+
Sbjct: 5196 CQES-SPCHQR--CFNAIGSFHCGCEPGYQLKGRKCM--DVNECRQNV--CRPDQHCKNTRGGYKCIDLCPNGMTKAENGT-CIDIDECKDGTHQCRYNQICENTRGSYRCVCPRGYRSQGVGRPCMDINECEQVPKPCAH---QCSNTPGSFKCICPPGQHLLGDGKSCAGLERLPNYGTQYSSYNLARFSPVRNNYQPQQHYRQYSHLYSSYSEYRNSRTSLSRTRRTIRKTCPEGSEASHDTCVDIDEC--ENTDAC-QHE-CKNTFGSYQCICPPGY 5461
The following BLAST results are available for this feature:
BLAST of TCONS_00002700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN14.607e-4037.44Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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