TCONS_00002699-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002699-protein
Unique NameTCONS_00002699-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002699-protein ID=TCONS_00002699-protein|Name=TCONS_00002699-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
CIDINECSSTNQCHQNATCTNNFGSYSCKCHEGFTGDGFKCDNVNECQLG
NNKCHPNAECVDNIGGYSCKCQQGFTGNGEICFDKNECLESPSSCHPNAE
CLNTIGSFKCQCKSGYKSNGTFCQDLNECLDVNLHHCFFGKCINTVGSYT
CHCYSGFEMKNGFCQDKNECVTGESKCHQNATCVNAFGSYKCFCDSGFHG
DGIQCKLVKSSTVAWSLIADFIDEHVKKMFEQQEQKLRTEEQEQIEDLLR
TIQNRSVAATQRCAACHQNATCSIDKETY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001458XLOC_001458Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002699TCONS_00002699Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR024731EGF_dom
IPR013032EGF-like_CS
IPR018097EGF_Ca-bd_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
NoneNo IPR availableGENE3D2.10.25.10coord: 172..193
e-value: 8.7E-13
score: 47.6
NoneNo IPR availableGENE3D2.40.155.10coord: 109..128
e-value: 1.1E-15
score: 57.3
NoneNo IPR availableGENE3D2.40.490.10coord: 129..148
e-value: 2.3E-10
score: 39.9
NoneNo IPR availableGENE3D2.10.25.10coord: 10..47
e-value: 4.2E-15
score: 55.4
coord: 149..171
e-value: 1.1E-11
score: 44.4
NoneNo IPR availableGENE3D2.10.25.10coord: 68..86
e-value: 2.0E-8
score: 33.5
coord: 194..246
e-value: 4.2E-7
score: 29.2
NoneNo IPR availableGENE3D2.10.25.10coord: 87..108
e-value: 1.3E-9
score: 37.5
NoneNo IPR availableGENE3D2.10.25.10coord: 48..67
e-value: 7.7E-10
score: 38.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 84..124
e-value: 1.09677E-4
score: 37.6162
NoneNo IPR availableCDDcd00054EGF_CAcoord: 125..161
e-value: 0.0056997
score: 32.6086
NoneNo IPR availableCDDcd00054EGF_CAcoord: 43..77
e-value: 7.09244E-5
score: 38.3866
NoneNo IPR availableCDDcd00054EGF_CAcoord: 3..37
e-value: 4.99207E-7
score: 44.1646
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1..55
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 46..84
IPR000742EGF-like domainSMARTSM00181egf_5coord: 128..165
e-value: 0.0054
score: 25.9
coord: 87..124
e-value: 0.001
score: 28.4
coord: 169..206
e-value: 5.2E-5
score: 32.7
coord: 6..42
e-value: 1.8E-5
score: 34.2
coord: 46..83
e-value: 4.7E-4
score: 29.5
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 43..83
score: 16.522
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 3..42
score: 17.352
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 84..124
score: 14.576
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 166..206
score: 14.249
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 125..165
score: 9.671
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 43..83
e-value: 1.1E-7
score: 41.5
coord: 84..124
e-value: 1.9E-10
score: 50.7
coord: 3..42
e-value: 1.5E-10
score: 51.0
coord: 125..165
e-value: 1.5E-8
score: 44.4
coord: 166..206
e-value: 2.1E-9
score: 47.3
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 125..159
e-value: 1.8E-7
score: 31.2
coord: 166..205
e-value: 1.2E-8
score: 34.9
IPR024731EGF domainPFAMPF12947EGF_3coord: 7..41
e-value: 1.9E-9
score: 37.5
coord: 47..82
e-value: 3.9E-8
score: 33.3
coord: 88..123
e-value: 6.6E-11
score: 42.1
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 151..164
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 192..205
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 69..82
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 28..41
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 110..123
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 43..69
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 166..192
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 142..153
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 19..30
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 183..194
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 101..112
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 60..71
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 82..207

Blast
[Close]
BLAST of TCONS_00002699-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.749e-42
Identity = 86/213 (40.38%), Postives = 113/213 (53.05%), Query Frame = 0 
Query:    1 CIDINECSSTNQCHQNATCTNNFGSYSCKCHEGFT--GDGFKCDNVNECQLGNNKCHPNAECVDNIGGYSC--KCQQGF--TGNGEICFDKNECLESPSSCHPNAECLNTIGSFKCQCKSGYKSNGTFCQDLNECLDVNLHHCFFGK-CINTVGSYTC--HCYSGF-EMKNGFCQDKNECVTGESKCHQNATCVNAFGSYKCFCDSGFHGDGI 203
            C D +EC++ N C    +C N  G+Y C C +G T   DG  C +++EC LG + CH   +C + IG Y C  +C  GF  T +G  C D NEC ES S CH    C N IGSF C C+ GY+  G  C D+NEC     + C   + C NT G Y C   C +G  + +NG C D +EC  G  +C  N  C N  GSY+C C  G+   G+
Sbjct: 5105 CADEDECAAGNPCSH--SCHNAMGTYYCSCPKGLTIAADGRTCQDIDECALGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINECQES-SPCH--QRCFNAIGSFHCGCEPGYQLKGRKCMDVNECRQ---NVCRPDQHCKNTRGGYKCIDLCPNGMTKAENGTCIDIDECKDGTHQCRYNQICENTRGSYRCVCPRGYRSQGV 5309

HSP 2 Score: 96.6709 bits (239), Expect = 2.288e-22
Identity = 68/241 (28.22%), Postives = 98/241 (40.66%), Query Frame = 0 
Query:    1 CIDINECSSTNQCHQNATCTNNFGSYSC--KCHEGFT-GDGFKCDNVNECQLGNNKCHPNAECVDNIGGYSCKCQQGF--TGNGEICFDKNECLESPSSCHPNAECLNTIGSFKCQCKSGYK--SNGTFCQDLNECLDVNLHHCFFG------------------KCINTVGSYTCH-----------------CYSGFEMKNGFCQDKNECVTGESKCHQNATCVNAFGSYKCFCDSGFH 199
            C+D+NEC   N C  +  C N  G Y C   C  G T  +   C +++EC+ G ++C  N  C +  G Y C C +G+   G G  C D NEC + P  C    +C NT GSFKC C  G     +G  C  L    +    +  +                   +  +   SY+ +                 C  G E  +  C D +EC   ++  H+   C N FGSY+C C  G+ 
Sbjct: 5228 CMDVNECRQ-NVCRPDQHCKNTRGGYKCIDLCPNGMTKAENGTCIDIDECKDGTHQCRYNQICENTRGSYRCVCPRGYRSQGVGRPCMDINECEQVPKPC--AHQCSNTPGSFKCICPPGQHLLGDGKSCAGLERLPNYGTQYSSYNLARFSPVRNNYQPQQHYRQYSHLYSSYSEYRNSRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHE---CKNTFGSYQCICPPGYQ 5462

HSP 3 Score: 93.9745 bits (232), Expect = 1.948e-21
Identity = 59/150 (39.33%), Postives = 78/150 (52.00%), Query Frame = 0 
Query:   65 GGYSCKCQQGFTGN--GEICFDKNECLESPSSCHPNAECLNTIGSFKCQCKSGYK--SNGTFCQDLNECLDVNLHHCFFGK-CINTVGSYTC--HCYSGFE-MKNGF-CQDKNECVTGESKCHQNATCVNAFGSYKCFCDSGFHGDGIQC 205
            G  S +C  GFT +  G  C D++EC       H    C N +G++ C C  G    ++G  CQD++EC  +  H C  G+ C NT+GSY C   C SGF    +G  CQD NEC    S CHQ   C NA GS+ C C+ G+   G +C
Sbjct: 5086 GDRSNQCPSGFTLDSVGPFCADEDECAAGNPCSH---SCHNAMGTYYCSCPKGLTIAADGRTCQDIDECA-LGRHTCHAGQDCDNTIGSYRCVVRCGSGFRRTSDGLSCQDINEC-QESSPCHQR--CFNAIGSFHCGCEPGYQLKGRKC 5228
The following BLAST results are available for this feature:
BLAST of TCONS_00002699-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN11.749e-4240.38Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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