TCONS_00002671-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002671-protein
Unique NameTCONS_00002671-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length636

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002671-protein ID=TCONS_00002671-protein|Name=TCONS_00002671-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MPKGHFDCGKVTSRKILYIIALTSVFWFSMNILLLIANNQAAKDSLNSLT
LTSDEHSDSHYMKHAKEVAPLVAAGKRVHRDLPWLKKEFFDNKIVPQQQT
VHKPGHREVYDISKEVNKQPGKGEMGVAAYLDTDAEKKYAEAIFKNHSFN
SVLSDKISLDRTIKDVRGAECAKQHSSYPSNLPTASVVICFHNEAKSVLL
RTVHSVINRTPPDLLKEIVIVDDKSEYANLKKPIDDHVKQLSNKVVVVRN
AKRSGLIKSRLAGAEKATGDVIVFLDSHCETTPGWVEPLLARIAEDRSNV
VVPIIEVLNADTLEYSAASNPDQRGGFGWDLMYKWKPIPLEEQKLRKSHI
DVIRTPAMAGGLFAIHRQYFYDMGSYDEEMDIWGGENLEMSFRIWMCGGR
VEIIPCSRVGHIFRKYTSPYKFPDGVEKTLAKNLNRLAEVWMDDYKELYY
NKRPHSKGMPFGDVSGRRRLRNKLGCKSFKWYLDNIYPDAPILDPYPPAK
GEIRNPSSGVCLDTMGTVKGDEAVKRKVGMYPCHSQGGNQHFIFTKKGEV
QFDEDYCFDVSSNSPGANIELWKCHGFGGNQKFIHNGPVGEIRHEPTGQC
VDRGNSGATLVIMKPCNGAANQKWKFSHYNATRPAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001446XLOC_001446Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002671TCONS_00002671Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 497..627
e-value: 2.3E-23
score: 93.6
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 500..624
e-value: 4.9E-26
score: 91.4
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 499..627
score: 23.04
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 493..628
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 130..454
e-value: 8.2E-61
score: 205.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 161..489
NoneNo IPR availableGENE3D2.80.10.50coord: 455..551
e-value: 4.2E-16
score: 58.8
NoneNo IPR availableGENE3D2.80.10.50coord: 552..634
e-value: 5.3E-19
score: 67.8
NoneNo IPR availableCDDcd02510pp-GalNAc-Tcoord: 186..487
e-value: 5.23648E-173
score: 496.342
NoneNo IPR availableCDDcd00161RICINcoord: 501..626
e-value: 2.34103E-30
score: 114.91
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 186..369
e-value: 6.2E-34
score: 117.1

Blast
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BLAST of TCONS_00002671-protein vs. Swiss-Prot (Human)
Match: GLT13 (Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2)

HSP 1 Score: 469.159 bits (1206), Expect = 1.839e-159
Identity = 249/509 (48.92%), Postives = 327/509 (64.24%), Query Frame = 0 
Query:  119 QPGKGEMGVAAYLDTDAEKKYAEAIFKNHSFNSVLSDKISLDRTIKDVRGAECAKQHSSYPSNLPTASVVICFHNEAKSVLLRTVHSVINRTPPDLLKEIVIVDDKSEYANLKKPIDDHVKQLSNKVVVVRNAKRSGLIKSRLAGAEKATGDVIVFLDSHCETTPGWVEPLLARIAEDRSNVVVPIIEVLNADTLEYSAASNPDQRGGFGWDLMYKWKPIPLEEQKLRKSHIDV-IRTPAMAGGLFAIHRQYFYDMGSYDEEMDIWGGENLEMSFRIWMCGGRVEIIPCSRVGHIFRKYTSPYKFPDGVEKTLAKNLNRLAEVWMDDYKELYYNKRPHSKGMPFGDVSGRRRLRNKLGCKSFKWYLDNIYPDAPILDPYPPAKGEIRNPSSGVCLDTMGTVKGDEAVKRKVGMYPCHSQGGNQHFIFTKKGEVQFDEDYCFDVSS-NSPGANIELWKCHGFGGNQKFIHNGPVGEIRHEPTGQCVDRGNSGATLV-IMKPCNGAANQKW 624
            Q G GEMG A  +  D ++K  E +FK + FN + SD I+L+R++ DVR   C  +   YP  LP  SVVI FHNEA S LLRTV+SVINR+P  LL E+++VDD SE   LK  ++++VK L   V ++R  +RSGLI++RL GA  + G VI FLD+HCE T GW+EPLLARI EDR  VV PII+V++ DT EY A S+    GGF W L ++W P+P  E   RK    + +RTP MAGGLF+I R YF ++G+YD  MDIWGGENLEMSFRIW CGG +EI+ CS VGH+FRK T PY FP G    + KN  RLAEVWMD++K+ +Y   P    + +GDVS R+ LR  L CK F WYL+NIYPD+ I   Y  + GEIRN  +  CLD MG  + +     KVG++ CH  GGNQ F +T   E++ D D C DVS  N P   + + KCH   GNQ + ++     +RH  + QC+D  +    +V  M+ C+G+ +Q+W
Sbjct:   54 QEGPGEMGKAVLIPKDDQEKMKE-LFKINQFNLMASDLIALNRSLPDVRLEGCKTK--VYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTY-GGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKAT-PYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCKPFSWYLENIYPDSQIPRRY-YSLGEIRNVETNQCLDNMGRKENE-----KVGIFNCHGMGGNQVFSYTADKEIRTD-DLCLDVSRLNGP---VIMLKCHHMRGNQLWEYDAERLTLRHVNSNQCLDEPSEEDKMVPTMQDCSGSRSQQW 547
The following BLAST results are available for this feature:
BLAST of TCONS_00002671-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT131.839e-15948.92Polypeptide N-acetylgalactosaminyltransferase 13 O... [more]
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