TCONS_00002598-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002598-protein
Unique NameTCONS_00002598-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002598-protein ID=TCONS_00002598-protein|Name=TCONS_00002598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MSMNNVTISTAALDTPNTTLLPQTATCFHIMDEANMTPHFKVTYITILAI
SFIFITVVNTFLVIGLKRAYTNLTLSKKLFLYLSASDLVTGIVTIPYQGV
MVIYGSSASCFQVQLQSFTNTFSPGLSMFTILTISIARYISVIKPTFFKS
HANSSWVSVYMFGQIVLAASAAVWYATATTRVHLGSYLVFVTGVCFVVIG
GAIILNVFLFIKLRSSHDSTKKDYQKEVIKTLIIISVILFICFLPNGVVF
ALVGYYIMADIDNMELYTKLIPWVYVPILLNAGLNSCVYIWRDKKINRYL
RKSIHNEQRRLSNKFNPLSSPLPITNKRLEAILSDHANRDSSYESYEHSE
V
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001413XLOC_001413Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002598TCONS_00002598Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 76..97
score: 19.99
coord: 228..252
score: 23.76
coord: 120..142
score: 25.39
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 72..285
e-value: 6.2E-6
score: 25.5
NoneNo IPR availableGENE3D1.20.1070.10coord: 44..315
e-value: 3.2E-23
score: 81.8
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 3..312
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 58..289
score: 14.434

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002598-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top