TCONS_00002522-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002522-protein
Unique NameTCONS_00002522-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002522-protein ID=TCONS_00002522-protein|Name=TCONS_00002522-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
NSVIVSYQLSNKTEAYTKIQVILVNRESNESFQFSTKAIVPMAKFQLNDL
ESGTQYKVKLASMSPDNRTSEMKEKDFLTAGPKRVKQAVVDHLTDTTAQI
SWQANKNPVDSYEIKITNNAGQSSIQKVLGNITTITLMDLSPDTKYMVEI
FAVKNSIKGMESETINFHTEQQVLVTKEPKTNTTTKSSTKPFTGVTPQPD
CPDICKEKGVMYGNIAHPTNPKRFIQCSFGKSFGCNNCAPGTYFIAGDGK
TTGGYCA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001348XLOC_001348Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002522TCONS_00002522Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR002557Chitin-bd_dom
IPR013783Ig-like_fold
IPR001699TF_T-box
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008061chitin binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005576 extracellular region
cellular_component GO:0005634 nucleus
molecular_function GO:0008061 chitin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 82..161
e-value: 0.0012
score: 28.1
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 89..162
e-value: 5.5E-11
score: 42.6
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 81..172
score: 14.383
IPR003961Fibronectin type IIICDDcd00063FN3coord: 90..169
e-value: 9.10487E-10
score: 52.8839
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 83..172
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 192..251
e-value: 1.8E-4
score: 20.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 76..173
e-value: 6.0E-15
score: 54.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..75
e-value: 0.038
score: 13.9
IPR001699Transcription factor, T-boxPFAMPF00907T-boxcoord: 39..176
e-value: 3.0E-4
score: 21.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002522-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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