TCONS_00002510-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002510-protein
Unique NameTCONS_00002510-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length691

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002510-protein ID=TCONS_00002510-protein|Name=TCONS_00002510-protein|organism=Clytia hemisphaerica|type=polypeptide|length=691bp
MEAILSDLNFDEGMALPIANVENKHMESELELKHKDIGRIRDDIDQYIER
VRAMSGHLKNVRQERQQTQELFNARNREVNTEEHAKQLAEREEGRLKAEI
LRLEKELDGIKERKNVYENNIFKGTEKVENLKGQMNWDQQSLNAWLKESA
KRDEDTLILQKYARADEGKIKELSLKQEKLVDESTKRRRALEHEITQTLT
TQLELDKVSEAFREAHQARQELLEQWENTIKQMQRRDNEIDEASLRLMEL
RVNVKTKQEDMKDRQQFLDDELNNNKEKEKKISMAERNAAKLRLEYQNIE
NSRQQFQDELETLKYKVDRTAKDLESTRRKANELKNEVAIRQDKLSRAVD
VKEELIEQLTLAEDSKMTAEERSDRLEAALKKEQQRIVDVEKELAKLREM
QFKKTQDLYQVRQMETNTNAEIHGAKAASRNLSSKLYKLDQESLKQQEIV
YNQDFQLQQAERKLIRLQGDRTNEEKNQLNEKIKQLTGILEGHQNKQTML
TAQLKKLGDDLRRANRDLSKGEDETKNLTNKIGELTLHNDSSERELRNIK
NKKEDLMVDENLLKLEIKRLRDQLFNRATEVLSLEDRRLLLETAMKERRQ
EIYIHTDMLKAQVKTSEDERQKISAELHERISKIEKLRKRYEILMVSMAP
PEGEEEKTQAYYVIKAAQEKEELQRTGDQLDAKIRKAEKEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001342XLOC_001342Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002510TCONS_00002510Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..400
NoneNo IPR availableCOILSCoilCoilcoord: 86..120
NoneNo IPR availableCOILSCoilCoilcoord: 205..260
NoneNo IPR availableCOILSCoilCoilcoord: 663..690
NoneNo IPR availableCOILSCoilCoilcoord: 457..496
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCOILSCoilCoilcoord: 504..573
NoneNo IPR availableCOILSCoilCoilcoord: 268..344
NoneNo IPR availableGENE3D1.20.5.340coord: 18..144
e-value: 4.4E-4
score: 19.5
coord: 493..606
e-value: 0.015
score: 14.5
NoneNo IPR availableGENE3D1.10.287.620coord: 272..408
e-value: 0.015
score: 14.3

Blast
[Close]
BLAST of TCONS_00002510-protein vs. Swiss-Prot (Human)
Match: CCD39 (Coiled-coil domain-containing protein 39 OS=Homo sapiens GN=CCDC39 PE=2 SV=3)

HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0
Identity = 325/688 (47.24%), Postives = 474/688 (68.90%), Query Frame = 0 
Query:    4 ILSDLNFDEGMALPIANVENKHMESELELKHKDIGRIRDDIDQYIERVRAMSGHLKNVRQERQQTQELFNARNREVNTEEHAKQLAEREEGRLKAEILRLEKELDGIKERKNVYENNIFKGTEKVENLKGQMNWDQQSLNAWLKESAKRDEDTLILQKYARADEGKIKELSLKQEKLVDESTKRRRALEHEITQTLTTQLELDKVSEAFREAHQARQELLEQWENTIKQMQRRDNEIDEASLRLMELRVNVKTKQEDMKDRQQFLDDELNNNKEKEKKISMAERNAAKLRLEYQNIENSRQQFQDELETLKYKVDRTAKDLESTRRKANELKNEVAIRQDKLSRAVDVKEELIEQLTLAEDSKMTAEERSDRLEAALKKEQQRIVDVEKELAKLREMQFKKTQDLYQVRQMETNTNAEIHGAKAASRNLSSKLYKLDQESLKQQEIVYNQDFQLQQAERKLIRLQGDRTNEEKNQLNEKIKQLTGILEGHQNKQTMLTAQLKKLGDDLRRANRDLSKGEDETKNLTNKIGELTLHNDSSERELRNIKNKKEDLMVDENLLKLEIKRLRDQLFNRATEVLSLEDRRLLLETAMKERRQEIYIHTDMLKAQVKTSEDERQKISAELHERISKIEKLRKRYEILMVSMAPPEGEEEKTQAYYVIKAAQEKEELQRTGDQLDAKIRKAEKEI 691
             L++L++++G A+P+AN ENK +E +L     +   ++D++ +Y ER+ +M+ H KNV+QE   TQ L  AR RE  +EEH K +A+RE GR+K EI RLE E+  I E+K+  EN IFK T+K++ LK QMNWDQQ+L AWL+ESA +D D L LQKYA+ D+ KI+ L+L+ E+L  E  ++R+ L++E+T+T++ QLELDK ++ FR+ H  RQEL++QWENTI+QMQ+RD +ID  +L L  ++   + K+  +K++ +FL+ E+ NN E EK+IS+A+R   K R  YQ+ E SR Q + EL++LK  V+RT+ DLE+ R+  +++K ++     +L +  +  E +  +L    +  M+ EE++  LE  LK+E++ + +V+ +L  ++ + FKK Q+L      E    +EI G +++ ++L+ +L KLD E+LKQQEI+Y+QDF +QQ ER++ RL+G+  +EEK  L  KI +L   LE  ++   +L  Q+KKL +DL    +  SK  DE ++L  KI EL L  D SE+EL   K  K+DLM+++NLLKLE+KR R+ L ++A EVLSLE R+  L TAM+ER +EI +H  ML +Q++  + ER+ IS E  ER+SKIEKL+ RYEIL V M PPEGEEEKTQAYYVIKAAQEKEELQR GD LDAKI KAEKEI
Sbjct:    5 FLAELHWEDGFAIPVANEENKLLEDQLSKLKDERASLQDELREYEERINSMTSHFKNVKQELSITQSLCKARERETESEEHFKAIAQRELGRVKDEIQRLENEMASILEKKSDKENGIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDALTLQKYAQQDDNKIRALTLQLERLTLECNQKRKILDNELTETISAQLELDKAAQDFRKIHNERQELIKQWENTIEQMQKRDGDIDNCALELARIKQETREKENLVKEKIKFLESEIGNNTEFEKRISVADRKLLKCRTAYQDHETSRIQLKGELDSLKATVNRTSSDLEALRKNISKIKKDIHEETARLQKTKNHNEIIQTKLKEITEKTMSVEEKATNLEDMLKEEEKDVKEVDVQLNLIKGVLFKKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQKLDFETLKQQEIMYSQDFHIQQVERRMSRLKGEINSEEKQALEAKIVELRKSLEEKKSTCGLLETQIKKLHNDLYFIKKAHSKNSDEKQSLMTKINELNLFIDRSEKELDKAKGFKQDLMIEDNLLKLEVKRTREMLHSKAEEVLSLEKRKQQLYTAMEERTEEIKVHKTMLASQIRYVDQERENISTEFRERLSKIEKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDCLDAKINKAEKEI 692
The following BLAST results are available for this feature:
BLAST of TCONS_00002510-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD390.000e+047.24Coiled-coil domain-containing protein 39 OS=Homo s... [more]
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