TCONS_00002299-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002299-protein
Unique NameTCONS_00002299-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length673

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002299-protein ID=TCONS_00002299-protein|Name=TCONS_00002299-protein|organism=Clytia hemisphaerica|type=polypeptide|length=673bp
MTQTKEKKEHCSVPLTACCPKKDIESVSITNVSECTDKESVAYSERSSLI
LNGATIFQGPNVQVDLEFKDLSYDVKIKKNETKRILKSVNGGFKKGELTA
VLGPSGAGKSSLLNILAGYNVSGTISGKVLVNGSERNLRRFRKISCYIMQ
DDILMPNLTVFESMMVSANLHLKSVLTIDEKHRVIEDILSCLGLINVRNT
YMSEISGGQRKRLAIALELVNNPPVIFLDEPTSGLDSLSAYQCISLMKSL
AEGGRTVICTIHQPSAKLFEMFDKLYLLTSGQCIYHGEMKTLVPYFETQN
LICPKYHNPADFIIEVASGEYGDRTSDLVKAWRIQEKRDELKRMEMGDFG
EGEDVDALLAQQMMVSMMPGCGYKSSTDSLSSTTSQTTQFAVLSKRAMVS
IIRDKMFTHLRFISVVMVAILIGLLYLGVGNDGNKVQSNTGCLFFSMLFL
MFIALMPTVLTFPLEKLVFIREHLNNWYSLKSYYLAITMADLPFQIVLPV
IYCSIVYFMTSQPNDGARYTQYVAITILTCLVAQSIGLLLGAVAPNVPTA
VFVAPVTGIPVLLFSGFFVSFDTIPKYMQWLTYISFARYSWEGMLVAIYG
NNRGALDCGDEPHRCRFPQSGDVLDAMDIDESALQIAQGKFYFDCVVLGL
FFVTLRLITYMVLRYKIKTSAER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001219XLOC_001219Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002299TCONS_00002299Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013525ABC_2_trans
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 95..281
e-value: 6.4E-14
score: 62.2
NoneNo IPR availableGENE3D3.40.50.300coord: 57..300
e-value: 1.2E-53
score: 181.7
NoneNo IPR availableCDDcd03213ABCG_EPDRcoord: 64..287
e-value: 3.32971E-89
score: 277.895
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 388..598
e-value: 6.9E-43
score: 146.4
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 86..233
e-value: 6.4E-28
score: 97.9
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 66..305
score: 19.615
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 205..219
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 66..306

Blast
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BLAST of TCONS_00002299-protein vs. Swiss-Prot (Human)
Match: ABCG4 (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=1 SV=2)

HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0
Identity = 337/610 (55.25%), Postives = 438/610 (71.80%), Query Frame = 0 
Query:   64 VDLEFKDLSYDVK----IKKNETKRILKSVNGGFKKGELTAVLGPSGAGKSSLLNILAGYNVSGTISGKVLVNGSERNLRRFRKISCYIMQDDILMPNLTVFESMMVSANLHLKSVLTIDEKHRVIEDILSCLGLINVRNTYMSEISGGQRKRLAIALELVNNPPVIFLDEPTSGLDSLSAYQCISLMKSLAEGGRTVICTIHQPSAKLFEMFDKLYLLTSGQCIYHGEMKTLVPYFETQNLICPKYHNPADFIIEVASGEYGDRTSDLVKAWRIQEKRDELKRMEMGDFGEGEDVDALLAQQMMVSMMPGCGYKSSTDSLSSTTSQTTQFAVLSKRAMVSIIRDKMFTHLRFISVVMVAILIGLLYLGVGNDGNKVQSNTGCLFFSMLFLMFIALMPTVLTFPLEKLVFIREHLNNWYSLKSYYLAITMADLPFQIVLPVIYCSIVYFMTSQPNDGARYTQYVAITILTCLVAQSIGLLLGAVAPNVPTAVFVAPVTGIPVLLFSGFFVSFDTIPKYMQWLTYISFARYSWEGMLVAIYGNNRGALDCGDEPHRCRFPQSGDVLDAMDIDESALQIAQGKFYFDCVVLGLFFVTLRLITYMVLRYKIKT 669
            VD+EF +LSY V+     +K   K +LK ++G F + EL  ++GPSGAGKS+ +NILAGY  SG + G++LVNG  R LR FRK+SCYIMQDD+L+P+LTV E+MMVSANL L     +  K  ++ +IL+ LGL++  +T  + +SGGQRKRLAIALELVNNPPV+F DEPTSGLDS S +Q +SLMKSLA+GGRT+ICTIHQPSAKLFEMFDKLY+L+ GQCI+ G +  L+PY +   L CP YHNPADFIIEVASGEYGD    L +A            ++ G     E   +    ++     P        +S +  TS  TQF +L KR  +SI+RD + THLRF+S V++ +LIGLLYL +G+D +KV +NTGCLFFSMLFLMF ALMPTVLTFPLE  VF+REHLN WYSLK+YYLA TMAD+PFQ+V PV+YCSIVY+MT QP + +R+  + A+   T LVAQS+GLL+GA + ++  A FV PVT IPVLLFSGFFVSF TIP Y+QW +Y+S+ RY +EG+++ IYG  RG L C +E  RC F +   +L A+D++++       K Y D +VLG+FF+ LRL+ Y+VLRY++K+
Sbjct:   59 VDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESG-MKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEKQEV--KKELVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEYGDLNPMLFRA------------VQNGLCAMAEKKSSPEKNEVPAPCPPCPPEVDPIESHTFATSTLTQFCILFKRTFLSILRDTVLTHLRFMSHVVIGVLIGLLYLHIGDDASKVFNNTGCLFFSMLFLMFAALMPTVLTFPLEMAVFMREHLNYWYSLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLFSALATATALVAQSLGLLIGAASNSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYGFEGVILTIYGMERGDLTCLEE--RCPFREPQSILRALDVEDA-------KLYMDFLVLGIFFLALRLLAYLVLRYRVKS 644
The following BLAST results are available for this feature:
BLAST of TCONS_00002299-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCG40.000e+055.25ATP-binding cassette sub-family G member 4 OS=Homo... [more]
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