TCONS_00002291-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002291-protein
Unique NameTCONS_00002291-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002291-protein ID=TCONS_00002291-protein|Name=TCONS_00002291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MSSRQILSKLGSFQEQAFVNGIWQSSASQKTFPVYSPSTGELVANVADCD
ANDTKKAIDVANQAFQLWKTTSCRERSALLKDLYEGMMSNQKDLATIMAI
ESGKPISEGMMEVKFAASFFEWYAGEAMRMNGEVLPNAEPNNRRIVIKQP
VGVCGLITPWNFPIGMITRKLGPALAAGCTAVLKPSEETPLTALAFGKIA
EEVGMPAGLLNIVTASRENTDQVGGALCDSDVIRKITFTGSTRVGKLLYE
RSAQNVKRLSMELGGNAPFIVFNSANAKLAAQKAVMSRFRNTGQTCVCAE
RVFVQDEIYDEFLEELKKCVAELQLGDPXV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001215XLOC_001215Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002291TCONS_00002291Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016162Ald_DH_N
IPR015590Aldehyde_DH_dom
IPR029510Ald_DH_CS_GLU
IPR016160Ald_DH_CS_CYS
IPR016161Ald_DH/histidinol_DH
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.309.10coord: 280..330
e-value: 2.3E-21
score: 76.1
IPR016162Aldehyde dehydrogenase N-terminal domainGENE3D3.40.605.10coord: 11..279
e-value: 2.8E-95
score: 318.3
IPR015590Aldehyde dehydrogenase domainPFAMPF00171Aldedhcoord: 23..328
e-value: 2.7E-108
score: 362.3
IPR029510Aldehyde dehydrogenase, glutamic acid active sitePROSITEPS00687ALDEHYDE_DEHYDR_GLUcoord: 261..268
IPR016160Aldehyde dehydrogenase, cysteine active sitePROSITEPS00070ALDEHYDE_DEHYDR_CYScoord: 289..300
IPR016161Aldehyde/histidinol dehydrogenaseSUPERFAMILY53720ALDH-likecoord: 13..328

Blast
[Close]
BLAST of TCONS_00002291-protein vs. Swiss-Prot (Human)
Match: SSDH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 1.302e-97
Identity = 145/316 (45.89%), Postives = 215/316 (68.04%), Query Frame = 0 
Query:   13 FQEQAFVNGIWQSSASQKTFPVYSPSTGELVANVADCDANDTKKAIDVANQAFQLWKTTSCRERSALLKDLYEGMMSNQKDLATIMAIESGKPISEGMMEVKFAASFFEWYAGEAMRMNGEVLPNAEPNNRRIVIKQPVGVCGLITPWNFPIGMITRKLGPALAAGCTAVLKPSEETPLTALAFGKIAEEVGMPAGLLNIVTASRENTDQVGGALCDSDVIRKITFTGSTRVGKLLYERSAQNVKRLSMELGGNAPFIVFNSANAKLAAQKAVMSRFRNTGQTCVCAERVFVQDEIYDEFLEELKKCVAE-LQLGD 327
             +  +FV G W  +A+  TFPV  P++G  +  VADC   + + A+  A +AF  W+  S +ERS+LL+  Y  M+ N+ DLA I+  ESGKP+ E   E+ ++A F EW++ EA R+ G+++     + R +V+KQP+GV  +ITPWNFP  MITRK+G ALAAGCT V+KP+E+TP +ALA  ++A + G+P+G+ N++  SR+N  +VG A+C   ++ KI+FTGST  GK+L   +A +VKR+SMELGG APFIVF+SAN   A   A+ S+FRNTGQTCVC+ +  VQ  I+D F++   + + + L++G+
Sbjct:   59 LRTDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGN 372
The following BLAST results are available for this feature:
BLAST of TCONS_00002291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SSDH1.302e-9745.89Succinate-semialdehyde dehydrogenase, mitochondria... [more]
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