TCONS_00002289-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002289-protein
Unique NameTCONS_00002289-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002289-protein ID=TCONS_00002289-protein|Name=TCONS_00002289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MSVRKKVLLMGKSGAGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL
GNLVLNLWDCGGQEAFMENYFASQRDNIFKNVAVLIYVFDVESRELEKDI
HYYQSCLEAVWEHSREAKIFCLIHKMDLVQEDQRDMIFKKRQQELTELSK
PLECTLFPTSIWDETLYKAWSSIVYKLIPNVNALEANLTRFAELIDADEV
LLFERATFLVISNCQRKSHKDVHRFEKVSNIIKQFKLSCSKLHAQFQSME
VRNSSFAAYIDAFTSNTYAMVVMSDTDIPPATTMINIRNARKYFEQLENE
KRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001213XLOC_001213Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002289TCONS_00002289Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006762Gtr1_RagA
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006762Gtr1/RagA G proteinPFAMPF04670Gtr1_RagAcoord: 6..232
e-value: 7.1E-105
score: 349.4
NoneNo IPR availableGENE3D3.40.50.300coord: 2..180
e-value: 2.3E-31
score: 108.1
NoneNo IPR availableCDDcd11384RagA_likecoord: 6..289
e-value: 0.0
score: 560.292
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 4..144
e-value: 7.9E-12
score: 43.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..182

Blast
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BLAST of TCONS_00002289-protein vs. Swiss-Prot (Human)
Match: RRAGA (Ras-related GTP-binding protein A OS=Homo sapiens GN=RRAGA PE=1 SV=1)

HSP 1 Score: 509.22 bits (1310), Expect = 0.000e+0
Identity = 240/297 (80.81%), Postives = 270/297 (90.91%), Query Frame = 0 
Query:    2 SVRKKVLLMGKSGAGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDNIFKNVAVLIYVFDVESRELEKDIHYYQSCLEAVWEHSREAKIFCLIHKMDLVQEDQRDMIFKKRQQELTELSKPLECTLFPTSIWDETLYKAWSSIVYKLIPNVNALEANLTRFAELIDADEVLLFERATFLVISNCQRKSHKDVHRFEKVSNIIKQFKLSCSKLHAQFQSMEVRNSSFAAYIDAFTSNTYAMVVMSDTDIPPATTMINIRNARKYFEQLE 298
            +++KKVLLMGKSG+GKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ+ FMENYF SQRDNIF+NV VLIYVFDVESRELEKD+HYYQSCLEA+ ++S +AKIFCL+HKMDLVQEDQRD+IFK+R+++L  LS+PLEC  F TSIWDETLYKAWSSIVY+LIPNV  LE NL  FA++I+ADEVLLFERATFLVIS+ Q K  +DVHRFEK+SNIIKQFKLSCSKL A FQSMEVRNS+FAA+ID FTSNTY MVVMSD  IP A T+INIRNARK+FE+LE
Sbjct:    5 AMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLE 301
The following BLAST results are available for this feature:
BLAST of TCONS_00002289-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RRAGA0.000e+080.81Ras-related GTP-binding protein A OS=Homo sapiens ... [more]
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