TCONS_00002241-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002241-protein
Unique NameTCONS_00002241-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length610

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002241-protein ID=TCONS_00002241-protein|Name=TCONS_00002241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MQTTNISTDAQGSTPYITLQPVSVDGGELTSGTLVQEGVNLQQAVMTNSN
SSDVKGDSSENNPQQQQQQVVLSIPSQQSILSATNGNSGQLVTYLQPLGN
IGVPVSNMDQGQVLMAASDLQGNVTLHNMANINGGKRNVLTTNRQATQVN
LSTPRRRLSTDPRSCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSF
RRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTC
DGCSKKFGRMSHLRKHQHNVCGRTSIRTSIAQCKYCDAIFSKKSDLKSHF
PVCEKKPERVEKDLNAQQVYQCETCGKVFSRVYDFKRHQLSHSDEKPYGC
PQCGKTFKERSSLNKHVKRMHCSEGDGTIPIDDDGIIADDDDEDEDELSV
DENELASQANITVPKAAVFTQSGIMTNAVSQVVTANGQTIPASEILNFPE
VAEALGINSGSHARVLNTDGHSTMIAITQPGNLETSEVSMDMEQNMMQDG
TIIVTDNSTTNTEPFITPNEQLNQITPVDESEPIETVDGIPVIYNPENVD
SSAASSIYTTSLASSMVFKRDSVKDYAIKHEEEVADHVKAEQAAAHDLQP
VEDPNMLVEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001186XLOC_001186Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002241TCONS_00002241Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 219..242
e-value: 0.044
score: 22.9
coord: 320..342
e-value: 4.8E-4
score: 29.5
coord: 248..268
e-value: 53.0
score: 6.9
coord: 348..371
e-value: 1.1E-4
score: 31.5
coord: 191..213
e-value: 0.0024
score: 27.1
coord: 163..185
e-value: 0.0039
score: 26.4
coord: 281..301
e-value: 150.0
score: 2.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 193..213
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 350..371
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 322..342
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 221..242
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 165..185
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 163..190
score: 12.84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 219..247
score: 12.3
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 348..376
score: 13.505
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 248..275
score: 9.743
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 191..218
score: 16.643
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 320..347
score: 15.064
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 242..299
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 162..213
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 199..257
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 319..368
NoneNo IPR availableGENE3D2.40.155.10coord: 233..259
e-value: 1.9E-8
score: 34.2
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 349..371
e-value: 9.4E-5
score: 22.8
NoneNo IPR availableGENE3D3.30.160.60coord: 115..174
e-value: 6.4E-8
score: 32.1
NoneNo IPR availableGENE3D2.20.28.10coord: 358..417
e-value: 7.0E-7
score: 28.6
NoneNo IPR availableGENE3D3.30.160.60coord: 175..199
e-value: 2.3E-15
score: 56.0
NoneNo IPR availableGENE3D3.30.160.60coord: 289..307
e-value: 0.069
score: 13.0
NoneNo IPR availableGENE3D3.30.160.60coord: 308..331
e-value: 2.6E-7
score: 30.2
NoneNo IPR availableGENE3D3.30.160.60coord: 260..288
e-value: 3.8E-8
score: 33.1
coord: 332..357
e-value: 2.0E-17
score: 62.8
NoneNo IPR availableGENE3D3.30.160.60coord: 218..232
e-value: 7.8E-11
score: 41.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 191..213
e-value: 1.7E-5
score: 24.9
coord: 320..342
e-value: 2.7E-5
score: 24.3
coord: 248..267
e-value: 0.0059
score: 16.9
coord: 165..185
e-value: 2.9E-5
score: 24.2
coord: 219..242
e-value: 0.02
score: 15.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..68
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 200..217
e-value: 3.1E-13
score: 49.0

Blast
BLAST of TCONS_00002241-protein vs. Swiss-Prot (Human)
Match: ZFP37 (Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.218e-41
Identity = 84/207 (40.58%), Postives = 114/207 (55.07%), Query Frame = 0
Query:  162 PRSCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTCDGCSKKFGRMSHLRKHQHNVCGRTSIRTSIAQCKYCDAIFSKKSDLKSHFPVCEKKPERVEKDLNAQQVYQCETCGKVFSRVYDFKRHQLSHSDEKPYGCPQCGKTFKERSSLNKHVK 368
            P  C++CG+ FKY S L KH++IHT  K F+C +C ++F +   L +H+R HT EKPY CN C   F H S+LT H+RT H    PF C+ C K F ++  L +HQ     R        +C  C   FS+KS L  H           ++    ++ Y+C  C K F+       HQ SH+ EKPY C +CGKTFK+ +SL KHVK
Sbjct:  432 PYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPYKCNECGKAFGHSSSLTYHMRT-HTGESPFECNQCGKGFKQIEGLTQHQ-----RVHTGEKPYECNECGKAFSQKSHLIVH-----------QRTHTGEKPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVK 621          

HSP 2 Score: 127.872 bits (320), Expect = 5.590e-31
Identity = 77/213 (36.15%), Postives = 99/213 (46.48%), Query Frame = 0
Query:  162 PRSCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTCDGCSKKFGRMSHLRKHQHNVCGRTSIRTSIAQCKYCDAIFSKKSDLKSHFPVCEKKPERVEKDLNAQQVYQCETCGKVFSRVYDFKRHQLSHSDEKPYGCPQCGKTFKERSSLNKHVKRMHCSE 374
            P  C++CG  F   S L  H + HT  K ++C  C ++    H L  H RIHTGEKPY C  C   FRH S L  H+R+ H   KP+ C  C K F   S L +H      RT       +C  C   F   S L  H  +              ++ ++C  CGK FS+      HQ +H+ EKPY C +CGK F   SSL  H+ R H  E
Sbjct:  320 PYECNECGIAFSQKSHLVVHQRTHTGEKPYECIQCGKAHGHKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHVRS-HTGEKPYECKECGKSFRYNSSLTEHV-----RTHTGEIPYECNECGKAFKYSSSLTKHMRI-----------HTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPYKCNECGKAFGHSSSLTYHM-RTHTGE 514          

HSP 3 Score: 100.523 bits (249), Expect = 3.924e-22
Identity = 66/197 (33.50%), Postives = 89/197 (45.18%), Query Frame = 0
Query:  180 KHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTCDGCSKKFGRMSHLRKHQHNVCGRTSIRTSIA--QCKYCDAIFSKKSDLKSHFPVCEKKPERVEKDLNAQQVYQCETCGKVFSRVYDFKRHQLSHSDEKPYGCPQCGKTFKERSSLNKHVKRMHCSE 374
            KH +    +K ++C  C +       L  H+R+HTGEKPY CN C   F   S L +H RT H   KP+ C  C K  G       H+H +     I T     +C  C   F   S+L  H            +    ++ Y+C+ CGK F        H  +H+ E PY C +CGK FK  SSL KH+ R+H  E
Sbjct:  282 KHEKPQACVKPYECNQCGKVLSHKQGLIDHQRVHTGEKPYECNECGIAFSQKSHLVVHQRT-HTGEKPYECIQCGKAHG-------HKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHV-----------RSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYSSSLTKHM-RIHTGE 458          

HSP 4 Score: 98.5969 bits (244), Expect = 1.450e-21
Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 0
Query:  155 RRRLSTDPRSCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTCDGCSKKFGRMSHLRKHQHNVCGRTSIRTSIAQCKYCDAIFSKKSDLKSH 299
            R      P  C++CG+ F + S L  H++ HT    F+C  C + F+++  L  H+R+HTGEKPY CN C   F   S L +H RT H   KP+ C+ C K F   S L  HQ     R+       +C  C   F + + L  H
Sbjct:  481 RTHTKEKPYKCNECGKAFGHSSSLTYHMRTHTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSHLIVHQRT-HTGEKPYECNECEKAFNAKSQLVIHQ-----RSHTGEKPYECNECGKTFKQNASLTKH 619          

HSP 5 Score: 85.8853 bits (211), Expect = 1.696e-17
Identity = 68/219 (31.05%), Postives = 90/219 (41.10%), Query Frame = 0
Query:  164 SCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRTRHDHLKPFTCDGCSKKFGRMSHLRKHQHNVCGRTSIRTSIAQCKYCDAIFSKKSDLKSHFPVCEKKPERVEKDLNAQQVYQCETCGKVFSRVYDFKRHQLSHSDEKPYGCPQCGKTFKERSSLNKHVKRMHCSEGDGTIPID 382
            S D+C +T K    L  H   H    K Q  + +     L     H +     KPY CN+C     H   L  H R  H   KP+ C+ C   F + SHL  HQ     RT       +C  C      K  L  H  +              ++ Y+C  CGK F    +  +H  SH+ EKPY C +CGK+F+  SSL +HV R H     G IP +
Sbjct:  238 SSDKCNKTGKKHDKLCCHSSSHIKQDKIQTGEKHEKSPSLSSSTKHEKPQACVKPYECNQCGKVLSHKQGLIDHQRV-HTGEKPYECNECGIAFSQKSHLVVHQ-----RTHTGEKPYECIQCGKAHGHKHALTDHLRI-----------HTGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECKECGKSFRYNSSLTEHV-RTH----TGEIPYE 434          

HSP 6 Score: 80.8777 bits (198), Expect = 6.098e-16
Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = 0
Query:  148 QVNLSTPRRRLST--DPRSCDQCGRTFKYPSDLKKHLQIHTDIKKFQCEDCNRSFRRLHQLNVHRRIHTGEKPYVCNRCNAQFRHDSTLTMHIRT 240
            Q+   T  +R+ T   P  C++CG+ F   S L  H + HT  K ++C +C ++F    QL +H+R HTGEKPY CN C   F+ +++LT H++T
Sbjct:  528 QIEGLTQHQRVHTGEKPYECNECGKAFSQKSHLIVHQRTHTGEKPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVKT 622          
The following BLAST results are available for this feature:
BLAST of TCONS_00002241-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFP371.218e-4140.58Zinc finger protein 37 homolog OS=Homo sapiens GN=... [more]
back to top