TCONS_00002190-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002190-protein
Unique Name	TCONS_00002190-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	219

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002190-protein ID=TCONS_00002190-protein|Name=TCONS_00002190-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
MVLMDKETTDIKVNLITKEPDVSFKKPPLQRSLSNGTRYPLLTQGECQVC
RIAHHKNLIQKIIFSKPLRKWETHQLNLSESNISASSPRGYMTYGIAYTE
ISEVLRNVQNGTKPPYTIHFVLPRFGSLLLQFNSAYERDQWYFSIYWKIT
ASRIRKLHTKIKRSDELINELKELINTCLAMPISDSNVFQLPLNAVSSLL
LLHGHEIGESLRVEILKVT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001141	XLOC_001141	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002190	TCONS_00002190	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..174

Blast

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BLAST of TCONS_00002190-protein vs. Swiss-Prot (Human)
Match: CMIP (C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 3.719e-31
Identity = 64/176 (36.36%), Postives = 109/176 (61.93%), Query Frame = 0

Query:   28 PLQRSL--SNGTRYPLLTQGECQVCRIAHHKNLIQKIIFSKPLRKWETHQLNLSESNISASSPRGYMTYGIAYTEISEV-LRNVQNGTKPPYTIHFVLPRFGSLLLQFNSAYERDQWYFSIYWKITASRIRKLHTKIKRSDELINELKELINTCLAMPISDSNVFQLPLNAVSSLL 200
            P +R+L   NG RY LL +G+ QVC I H +  + KI+ SK LR+WE H L L+++++++++P GYM   ++Y+ I +V L + +N   P Y +   +P  G++LLQ  ++Y RDQW+ S+ WK    + +K+ +   R + ++ E++ L++  L  P+ D ++ Q PL  VS LL
Sbjct:   39 PCRRALLLCNGMRYKLLQEGDIQVCVIRHPRTFLSKILTSKFLRRWEPHHLTLADNSLASATPTGYMENSVSYSAIEDVQLLSWENA--PKYCLQLTIPG-GTVLLQAANSYLRDQWFHSLQWKKKIYKYKKVLSNPSRWEVVLKEIRTLVDMALTSPLQDDSINQAPLEIVSKLL 211

The following BLAST results are available for this feature:

BLAST of TCONS_00002190-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002190-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CMIP	3.719e-31	36.36	C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=...	[more]

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TCONS_00002190-protein (polypeptide) - C. hemisphaerica