TCONS_00002187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002187-protein
Unique NameTCONS_00002187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002187-protein ID=TCONS_00002187-protein|Name=TCONS_00002187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=115bp
QALVSLLDFDLMKDEEENLEIIAALQSSDEGQKQYDQLCTKKEEFINMKK
SGGPHKLTLPSQSTDEDLIHVLKNGSFGNLQSLNLAFTSVTSDSADYIIK
LPSLIHLNLWATQVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001138XLOC_001138Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002187TCONS_00002187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 11..115
e-value: 2.6E-5
score: 22.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 76..109

Blast
[Close]
BLAST of TCONS_00002187-protein vs. Swiss-Prot (Human)
Match: CMIP (C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 1.654e-34
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = 0 
Query:    1 QALVSLLDFDLMKDEEENLEIIAALQSSDEGQKQYDQLCTKKEEFINMKKSGGPHKLTLPSQSTDEDLIHVLKNGSFGNLQSLNLAFTSVTSDSADYIIKLPSLIHLNLWATQ 113
            + L  +L+++++ + +  L+II+ L+S+D G++ Y+QLC ++ E   +++ GGP +LTLPS+STD DL  +L +GSFGNL++L+LAFT+VTS  A+++IKLPSL  LNLW+TQ
Sbjct:  585 EILCLMLEYNIIDNNDTQLQIISTLESTDVGKRMYEQLCDRQRELKELQRKGGPTRLTLPSKSTDADLARLLSSGSFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQ 697
The following BLAST results are available for this feature:
BLAST of TCONS_00002187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMIP1.654e-3448.67C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=... [more]
back to top