TCONS_00002157-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002157-protein
Unique NameTCONS_00002157-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1022

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002157-protein ID=TCONS_00002157-protein|Name=TCONS_00002157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1022bp
MKGKFCFHTPSEIKVVGSFLLKTMIKANHSIDIAVQMPQAVLHGKDYLNY
RYYYKRAIYLSWLAYYLKDWEHTEDLSFTCGTNIFKPTLKINLKGKVGKK
FNVVLHLATPEGHFKLSRFLPLKNNIRHNWYHGYEQDTTEEIEFPTADYN
NGVLEDMLYEDHLRLLYSTLKECPGMSEAILLLKTWLKQRSYKGNVPFNG
FCCSMLLVYLLSVRKISAHMSSYQMFRLTLHFIGTSDWSKEGITLNKDTN
EDEKLPSLKDFHGVYPVVFVDSSGHLNLCSSLDTISYQMLRYEAQQSLAL
LDSTEEGSFELLFIKTKSFLQTVDHMFRINDAGSFTTKLSTEENNKLISY
GGNARPILLEKMSEILRRGLDERITSLFMKPSPLVQWSVNESCPDSSKGP
ITVGVCLNASNYDNVLIMGPPADQPQAKEFRAFWGEKSELRRFQDGSINE
AVVWPSSNSSQKKMVCKQIVQHLLKLHCAIYPSSIDYHGNSFDFILSSNT
SSFEHASANQKKATIPRGCGEEESTHVIKTFEELSRQLRGLSELPLVVNN
IHAVDPLLRMTEPLTARQYEVKEQSKGQDFLVPSNAKRSPLWCPVIKAYI
QFEGSGQWPDNLEAIQHIRAAFHIKVAECIRQQLHFPAKATPRWIDVMKN
GYVFRLSVIHYREMVLHKENVALGKSKTSHDIQAKKLEMEIVKKPLHNSL
IHSLNGQFGAFSLTCRLAKRWMSSQMLSNHFYEELIELLVASVFLSPNPP
NSSLCGFVRFLDHIATFDWNANPLIVNLNSEIKSESMEALKERFTNSRDH
LPHMVVMTPYDVDGTLWTKQQPSPQVVKRLSLLAQAALALVESDGFEFTQ
QTIMQLFRPSTKDYDIVIELDKNHVPKLPFIQSSKSVHKSSDVKLASMVS
NNVSNEVLPVVDFDPARSFLDQLQELFNDTAMFFCDQYGGSQIGVVWKRN
KLAAQPFKIMNAKYKHVEEDVAQKKKKKQKAKDTKITTNEETMLKTNTKA
IIQDFSILGQGLVKNIQVVNQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001124XLOC_001124Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002157TCONS_00002157Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 964..984
NoneNo IPR availablePFAMPF17404Nrap_D3coord: 320..479
e-value: 1.2E-41
score: 142.4
NoneNo IPR availablePFAMPF17407Nrap_D6coord: 862..1016
e-value: 1.5E-27
score: 96.4
NoneNo IPR availablePFAMPF17406Nrap_D5coord: 708..859
e-value: 5.0E-46
score: 156.3
NoneNo IPR availablePFAMPF17403Nrap_D2coord: 176..315
e-value: 2.7E-40
score: 137.5
NoneNo IPR availablePFAMPF17405Nrap_D4coord: 512..705
e-value: 9.7E-44
score: 149.2
NoneNo IPR availableGENE3D1.10.1410.10coord: 153..318
e-value: 6.0E-12
score: 44.8
coord: 676..858
e-value: 6.7E-8
score: 31.6
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 31..171
e-value: 2.1E-34
score: 118.7

Blast
BLAST of TCONS_00002157-protein vs. Swiss-Prot (Human)
Match: NOL6 (Nucleolar protein 6 OS=Homo sapiens GN=NOL6 PE=1 SV=2)

HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0
Identity = 379/1043 (36.34%), Postives = 576/1043 (55.23%), Query Frame = 0
Query:    1 MKGKFCFHTPSEIKVVGSFLLKTMIKANHSIDIAVQMPQAVLHGKDYLNYRYYYKRAIYLSWLAYYLKDWE--HTEDLSFTCGTNIFKPTLKINLKGKVGKKFNVVLHLATPEGHFKLSRFLPLKNNIRHNWYHGYEQDTTEEIEFPTADYNNGVLEDMLYEDHLRLLYSTLKECPGMSEAILLLKTWLKQRSY-KGNVPFNGFCCSMLLVYLLSVRKISAHMSSYQMFRLTLHFIGTSDWSKEGITLNKDTNEDEKLPSLKDFHGVYPVVFVDSSGHLNLCSSLDTISYQMLRYEAQQSLALLDSTEEGSFELLFIKTKSFLQTVDHMFRIN-----DAGSFTTKLSTEENNKLISYGGNARPILLEKMSEILRRGLDERITSLFMKPSPLVQWSVNESCP---DSSKGPITVGVCLNASNYDNVLIMGPPADQPQAKEFRAFWGEKSELRRFQDGSINEAVVWPSSNSSQKKMVCKQIVQHLLKLHCAIYPSSIDYHGNSFDFILSS--NTSSFEHASANQKKATIPRGCGEEESTHVIKTFEELSRQLRGLSELPLVVNNIHAVDPLLRMTE---PLTAR-QYEVKEQSKGQDFLVPSNAKRSPLWCPVIKAYIQFEGSGQWPDNLEAIQHIRAAFHIKVAECIRQQLHFPAKATPRWIDVMKNGYVFRLSVIHYREMVLHKENVALGKSKTSHDIQAK-KLEMEIVKKPLHNSLIHSLNGQFGAFSLTCRLAKRWMSSQMLSNHFYEELIELLVASVFLSP---NPPNSSLCGFVRFLDHIATFDWNANPLIVNLNSEIKSESMEALKERFTNSRDHLPHMVVMTPYDVDGTLWTKQQPSPQVVKRLSLLAQAALALVESDGFE-FTQQTIMQLFRPSTKDYDIVIELDKNHVPKLPFIQSSKSVHKSSDVKLASMVSNNVSNEVLPVVDFDPARSFLDQLQELFNDTAMFFCDQYGGSQIGVVWKRNKLAAQPFKIMNAKYKHVEEDVAQKKKKKQKAKDTKITTNEETMLKTNTKAIIQDFSILGQGLVKNIQVVNQ 1021
            +KG F F  P+++ VVGS+LL T I+ + ++D+A+ MP+ +L  KD LN RY+ KRA+YL+ LA++L       +   S+T G ++ KP+L +  +GK  +   V LH   P   F+  R LP KNN+R  WY G         E PT  YN  VL+D + E HL+LL + L    G+ + + LLK WL+QR   KG   F GF  SML+V+L+S RKI   MS YQ+ R  L F+ T+D +  GI+L    + D  LP+L DFH  + VVF+DSSGHLNLC+ +   +Y  +++EA+ S+ LLDS  +  F LL +  K  ++  DH+  +       A     KL  E  +     GG+     L  ++ +L +GL  R+  L     P+ +W +++  P   DS    +T+G+ L      +VL +GP ADQP+A +FR FWG +SELRRFQDG+I EAVVW +++ SQK+++  Q+V HLL LH  I  + + Y G   D ++     TSS                 GEE     ++ +++LSR L GL  LPL V+ +    P+LR TE   P   R  +   E  + +  L+P   K  P +   +      EGSGQWP + EA+Q +RAAF +++AE + QQ     +AT    DV+K+G+VFR+ V + RE  + KE  +     +  D  A  +LE +  + PL  S +H L  Q  AFS   RLAKRW+ +Q+L   F +E ++L+ A++FL P    PP+S   GF+RFL  ++TFDW  NPL VNLN+E+  E    ++  F  +R  LP MV++TP D   ++WT+  PS Q++++L +LA  AL ++E    +      I  +FRP    YD++I L   H+P+       ++V   +      ++S    + ++PV+ +DP + +L QL+E F D A+FF DQ+GG  IGV+WK      QPFK  + K + V                  ++   E ++  N +AI++DF++LG+GLV+ ++  ++
Sbjct:  148 VKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDVALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHL-KPSLLLRPRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTWVLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLVSTRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLC--LSSDPSLPALADFHQAFSVVFLDSSGHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLSRLQAACHRLKLWPELQDN----GGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQDPPKHKDSGT--LTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREAVVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSS----------------TGEEALVAAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFYETLRERSSLLPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRATATHTDVLKDGFVFRIRVAYQREPQILKEVQSPEGMISLRDTAASLRLERDTRQLPLLTSALHGLQQQHPAFSGVARLAKRWVRAQLLGEGFADESLDLVAAALFLHPEPFTPPSSPQVGFLRFLFLVSTFDWKNNPLFVNLNNELTVEEQVEIRSGFLAARAQLPVMVIVTPQDRKNSVWTQDGPSAQILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRPPLDIYDVLIRLSPRHIPR-----HRQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYLTQLREAFGDLALFFYDQHGGEVIGVLWKPTSFQPQPFKASSTKGRMV------------------MSRGGELVMVPNVEAILEDFAVLGEGLVQTVEARSE 1142          
The following BLAST results are available for this feature:
BLAST of TCONS_00002157-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOL60.000e+036.34Nucleolar protein 6 OS=Homo sapiens GN=NOL6 PE=1 S... [more]
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