TCONS_00002148-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002148-protein
Unique NameTCONS_00002148-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length99

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002148-protein ID=TCONS_00002148-protein|Name=TCONS_00002148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=99bp
MAPRGYEYELVGESAQNMDLKCPVCKHLIRDCVELPCAHTMCKNCVDFIS
NEQAKNGTPIDEDDEEDTVCPICETVYXNNLHPQKQYFCFFGIFQPRLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001121XLOC_001121Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002148TCONS_00002148Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 22..73
e-value: 1.2E-5
score: 34.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 22..74
score: 10.527
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 22..51
e-value: 8.3E-6
score: 25.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 11..60
e-value: 1.9E-7
score: 30.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 61..95
e-value: 0.013
score: 14.8
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 37..46
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 19..79

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002148-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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