TCONS_00002099-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002099-protein
Unique Name	TCONS_00002099-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	675

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002099-protein ID=TCONS_00002099-protein|Name=TCONS_00002099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MPLSTFYRNPYSNSSAPALQQNPHSYSIREPLVSKLEMHLSCANLKDRDY
LSKSDPMVVIFVEVPKGDKRIWKEYDRTESVRDDLNPTFVKSIIIEYYFE
VYQRMKFEVYDRDSSSAVLNNHDFLGYVEVSLGSIVGEHGGTTTKNLYSR
QKEKLRSTITFNVEELFDTKEILKLQIKGHRLDQKDLFSSSDPFIVISRC
SLENNNFLPVYKTEMIKNNNSPIWKKFEIPVTTLCNGDRDRVIRFECFDS
GSKRTLIGSCDTSLNELLRDPKQKLVLTQKKSKAHAGSLRLQFIEIESKA
SFLDYIAAGLQLCFHVAIDFTASNGNVALPSSLHYPHGTNQYMEALWNVG
RICEDYDTDKLITAYGFGAKVNKQIAHDFHLNFKRDPHCNGILGVLQAYQ
NAIKYVEFFGPTNFAPIINKIADLAEKQATFDKYHVVLILTDGMISDIGL
TKKALIRASRLPISVIIVGVGSGNFDSMVELDSDDKLLIFQDQTADRDIV
QFVAYENFSGCFAAVDLAQEVLYEVPYQLTSYMEKHRIDPKHGLTPRETP
PSSPLDNVEMKLGDVSSTSEVSLPAALKENTEQKEKPKRKFSRSHKRKES
KVDAPKIENKELPFAKKEMTAKDFAMSFLKENKERQRKKSEAREAAAAAE
RKRSVIVAQNQHMCNCSSKKHLDRI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001098	XLOC_001098	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002099	TCONS_00002099	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR002035	VWF_A
IPR010734	Copine

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 630..652
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 538..603
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 631..653
None	No IPR available	CDD	cd04048	C2A_Copine	coord: 34..154 e-value: 1.05731E-48 score: 165.82
None	No IPR available	CDD	cd04047	C2B_Copine	coord: 171..277 e-value: 2.021E-39 score: 140.008
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 35..144 e-value: 8.5E-8 score: 41.9 coord: 172..276 e-value: 1.1E-9 score: 48.1
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 40..142 e-value: 4.8E-10 score: 39.6 coord: 177..270 e-value: 6.6E-8 score: 32.7
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 33..164 e-value: 5.6E-16 score: 58.0
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 169..284 e-value: 4.8E-15 score: 55.1
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 9..129 score: 11.448
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 177..292
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 31..167
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 311..504 e-value: 9.5E-9 score: 45.1
IPR002035	von Willebrand factor, type A	GENE3D	3.40.50.410		coord: 285..504 e-value: 2.2E-6 score: 27.3
IPR002035	von Willebrand factor, type A	SUPERFAMILY	53300	vWA-like	coord: 316..503
IPR010734	Copine	PFAM	PF07002	Copine	coord: 332..541 e-value: 8.9E-68 score: 227.9

Blast

[Close]

BLAST of TCONS_00002099-protein vs. Swiss-Prot (Human)
Match: CPNE8 (Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2)

HSP 1 Score: 411.379 bits (1056), Expect = 2.292e-136
Identity = 236/546 (43.22%), Postives = 339/546 (62.09%), Query Frame = 0

Query:   13 NSSAPALQQNPHSYSIREPLVSKLEMHLSCANLKDRDYLSKSDPMVVIFVEVPKGDKRIWKEYDRTESVRDDLNPTFVKSIIIEYYFEVYQRMKFEVYDRDSSSAVLNNHDFLGYVEVSLGSIVGEHGGTTTKNLYSRQKEKLRSTITFNVEELFDTKEILKLQIKGHRLDQKDLFSSSDPFIVISRCSLENNNFLPVYKTEMIKNNNSPIWKKFEIPVTTLCNGDRDRVIRFECFD--SGSKRTLIGSCDTSLNELLRDPKQKLVL--------TQKKSKAHAGSLRLQFIEIESKASFLDYIAAGLQLCFHVAIDFTASNGNVALPSSLHY--PHGTNQYMEALWNVGRICEDYDTDKLITAYGFGAKV--NKQIAHDFHLNFK-RDPHCNGILGVLQAYQNAIKYVEFFGPTNFAPIINKIADLAEKQATFDKYHVVLILTDGMISDIGLTKKALIRASRLPISVIIVGVGSGNFDSMVELDSDDKLLIFQDQTADRDIVQFVAYENF---SG--CFAAVDLAQEVLYEVPYQLTSYMEKHRI 538
            NS+A     N  S +I     +++E+ +SC NL DRD  SKSDP+ V++V+   G+K  W+E+ RTE + + LNP FV+  I++Y+FE  + ++F++YD DS S  L+ HDFLG V  +LG IVG  G    K +     +K   TI    EEL   ++ + +Q   ++LD+KD F  SDPF+V  R S E+ +F   +KTE++KN  +P+W+ F+I V  LCNGD DR I+ E +D         IG   TS  EL R   Q  V          +KK   ++G++ L    +E++ SFLDYI  G Q+ F VAIDFTASNGN A P+SLHY  P+  N Y  AL  VG I +DYD+DK+  A GFGAK+  + +I+H+F LN   ++P+C+GI GV++AY  ++K V+ +GPTNFAP+IN +A  A       +Y V+LI+TDG+ISD+  TK++++ AS+LP+S+IIVGVG   FD+MVELD DD  +  + + A+RDIVQFV + ++   SG    +   LA++VL E+P Q  SYM    I
Sbjct:    6 NSTAGIGDLNQLSAAIP---ATRVEVSVSCRNLLDRDTFSKSDPICVLYVQ-GVGNKE-WREFGRTEVIDNTLNPDFVRKFILDYFFEERENLRFDLYDVDSKSPNLSKHDFLGQVFCTLGEIVGSQGSRLEKPIVGIPGKKC-GTIILTAEELNCCRDAVLMQFCANKLDKKDFFGKSDPFLVFYR-SNEDGSFTICHKTEVVKNTLNPVWQAFKISVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELSRGQSQFNVYEVVNPKKKGKKKKYTNSGTVTLLSFLVETEVSFLDYIKGGTQINFTVAIDFTASNGNPAQPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRARGI 544

The following BLAST results are available for this feature:

BLAST of TCONS_00002099-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CPNE8	2.292e-136	43.22	Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2	[more]

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TCONS_00002099-protein (polypeptide) - C. hemisphaerica