TCONS_00002061-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002061-protein
Unique NameTCONS_00002061-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length545

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002061-protein ID=TCONS_00002061-protein|Name=TCONS_00002061-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MVQYVEHDTLVNELVTLENFSPEDRLAHARKRRHEQIKSYDSRETNPNAY
PPVHASHNKRIRFDKNIELIEAASRNDSDEVEHLLTQAGVSADLQNEDGL
SALHQAVIEDCQDVVETLIRHGADLDIKDADLWTPLHAAVACGNLDLVKY
LVEKGASLVEINTDGNMAIDLVEDMEEIEIFLDEAMAGKGYDEEGLEQIR
NETATLMLDELREAAQQNSYDFNVQGSHGETVMHIAAANGYDQVVEYLLD
HGAKISVVDHDAWQPIHAAACWGHDKIIEILVNHGADLDALTKDGETPFD
LTEDEDLQGMIIELKESGTKSHKLKRSQSNSSRTLSVRRTSIVEKHKISV
NDAKQEGIFRQNPDFLHVVINTGEEEEEEETRKGETTSNNKENLSSPDEK
QPAQPSQPPVVVAPSPPQQPTEAEQQQKQSEGSVSVNLSTGVHYKAVEQK
ISIESDTESESATNHVTKANNTLSNGGVSADTYPEGRYTKLAADSTPQPN
TDSSQIVLELGDGGQHSHNTAVQNHDKELQQSTDMSVKKKCCVIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001084XLOC_001084Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002061TCONS_00002061Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 229..244
score: 35.1
coord: 277..291
score: 34.68
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 98..127
e-value: 0.0035
score: 26.6
coord: 131..160
e-value: 1.5E-5
score: 34.4
coord: 228..257
e-value: 2.4E-5
score: 33.8
coord: 261..290
e-value: 9.9E-4
score: 28.4
coord: 64..94
e-value: 3600.0
score: 0.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 131..163
score: 11.728
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 261..293
score: 11.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 98..130
score: 12.983
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 228..260
score: 13.704
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 69..158
e-value: 7.4E-15
score: 55.2
coord: 218..289
e-value: 2.7E-13
score: 50.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 200..356
e-value: 1.3E-29
score: 102.5
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 24..186
e-value: 8.4E-32
score: 109.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 64..326
score: 47.933
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 54..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..484
NoneNo IPR availableCDDcd00204ANKcoord: 93..282
e-value: 5.72486E-28
score: 107.469

Blast
[Close]
BLAST of TCONS_00002061-protein vs. Swiss-Prot (Human)
Match: PP16A (Protein phosphatase 1 regulatory subunit 16A OS=Homo sapiens GN=PPP1R16A PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.612e-78
Identity = 145/379 (38.26%), Postives = 219/379 (57.78%), Query Frame = 0 
Query:    4 YVEHDTLVNELVTLENFSPEDRLAHARKRRHEQIKSYDSRET------NPNAYPPVHASHN---KRIRFDKNIELIEAASRNDSDEVEHLLTQAGVSADLQNEDGLSALHQAVIEDCQDVVETLIRHGADLDIKDADLWTPLHAAVACGNLDLVKYLVEKGASLVEINTDGNMAIDLVEDMEEIEIFLDEAMAGKGYDEEGLEQIRNETATLMLDELREAAQQNSYDFNVQGSHGETVMHIAAANGYDQVVEYLLDHGAKISVVDHDAWQPIHAAACWGHDKIIEILVNHGADLDALTKDGETPFDLTEDEDLQGMIIELKESGTKSHKLKR------------SQSNSSRTLSVRRTSIVEKHKISVNDAKQEGIFRQ 361
              EH  L+ E+  +   S ++RL HA+KRR +Q+K +   E        P   P   A+     K++ F  ++ L+EAA+RND +EV   L  +GVS DL NEDGL+ALHQ  I+D +++V+ L+  GA+++  D++ WTPLHAA  CG+L LV+ L+  GA+L+ +NTDGNM  DL +D + ++  L+ AMA +G  ++ +E  R      MLD++R   Q  + D +    HG T++H+AAANG+ +    LL+H A +S  D D W+P+HAAA WG   ++E+LV HGADL+A +   ETP D+  DE+++  ++ELK    K   L R            + S  SR   VRR S+ ++  +      QE I  Q
Sbjct:    1 MAEHLELLAEMPMVGRMSTQERLKHAQKRRAQQVKMWAQAEKEAQGKKGPGERPRKEAASQGLLKQVLFPPSVVLLEAAARNDLEEVRQFLG-SGVSPDLANEDGLTALHQCCIDDFREMVQQLLEAGANINACDSECWTPLHAAATCGHLHLVELLIASGANLLAVNTDGNMPYDLCDDEQTLDC-LETAMADRGITQDSIEAARAVPELRMLDDIRSRLQAGA-DLHAPLDHGATLLHVAAANGFSEAAALLLEHRASLSAKDQDGWEPLHAAAYWGQVPLVELLVAHGADLNAKSLMDETPLDVCGDEEVRAKLLELKH---KHDALLRAQSRQRSLLRRRTSSAGSRGKVVRRVSLTQRTDLYRKQHAQEAIVWQ 373
The following BLAST results are available for this feature:
BLAST of TCONS_00002061-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP16A4.612e-7838.26Protein phosphatase 1 regulatory subunit 16A OS=Ho... [more]
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