TCONS_00002043-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002043-protein
Unique NameTCONS_00002043-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002043-protein ID=TCONS_00002043-protein|Name=TCONS_00002043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MSSPKLKTALGNIVAAEKALKTSMFKWSPDYDTAASEYTKAATNFKLAGS
AEKAQDAYIKASQMQEKLGSLFHAAKLLTQAAGIASDLKNLEEAVTLMQR
ACSLYREHGTPDTAALTISKAAKMCETGLPSKATEMYLLAAELCENDEKL
RDSADHLNNAVRMELKQKKYKEAATIMKQRCELFKKLQNPNNAHQLTLCM
AIVYLAAGDFVQAETAFKDGFEVDRFGDSDEAMYTEQFLKAYQEYDAELL
NQTKSAPLVKYLDTEIARLAKTLELSTCKNIPSKLDIGGKSELEQFEDQL
GDQDKVAGDIEQNNEADEGEVEGMLC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001075XLOC_001075Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002043TCONS_00002043Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14938SNAPcoord: 15..252
e-value: 1.5E-24
score: 86.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..326
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1..276
e-value: 4.0E-30
score: 104.4
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 9..250

Blast
BLAST of TCONS_00002043-protein vs. Swiss-Prot (Human)
Match: SNAG (Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.180e-55
Identity = 97/273 (35.53%), Postives = 166/273 (60.81%), Query Frame = 0
Query:    1 MSSPKLKTALGNIVAAEKALKTSMFKWSPDYDTAASEYTKAATNFKLAGSAEKAQDAYIKASQMQEKLGSLFHAAKLLTQAAGIASDLKNLEEAVTLMQRACSLYREHGTPDTAALTISKAAKMCETGLPSKATEMYLLAAELCENDEKLRDSADHLNNAVRMELKQKKYKEAATIMKQRCELFKKLQNPNNAHQLTLCMAIVYLAAGDFVQAETAFKDGFEVDRFGDSDEAMYTEQFLKAYQEYDAELLNQTKSAPLVKYLDTEIARLAKTL 273
            M++ K+   L ++  AEK LKT   KW PDYD+AASEY KAA  FK A   E+A+DA ++ +   E   +LFHAAK   QA  +  +++ L EAV L+++A  +Y E+GTPDTAA+ + +A K+ E   P KA ++Y   A + EN+E+LR + + L  A R+ ++ +++ EAA  +++   ++K+++N    ++ T+   +V+L   D+V AE   ++ + +  F  S++    EQ L+ Y + D + ++   ++PL KY+D + A+L  +L
Sbjct:    1 MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSDVCNSPLFKYMDNDYAKLGLSL 273          
The following BLAST results are available for this feature:
BLAST of TCONS_00002043-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNAG2.180e-5535.53Gamma-soluble NSF attachment protein OS=Homo sapie... [more]
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