TCONS_00002023-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002023-protein
Unique NameTCONS_00002023-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002023-protein ID=TCONS_00002023-protein|Name=TCONS_00002023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
MHDMYTMLSKRMNLILFLGVIFWCAVFVHSSTADDYLNKCISSTNHKNVP
GKEGKAMENYHCTPWQNKSCCTWNTTDNIDKDGALSLYNIVWDQCPKIQN
MSDKCKQHFKRDTCFYECSPNLGPWIVADTTSKKTRKERVRNVPICKSDC
EAWFSDCSEDYTCNDNWATGWDWSKKGTPTMCPKSCKKFKDYFSSAKQFC
EKLFDGSFVYSENNENCMNMVPVGDNNVKVSEKKAEDLASTAARIQQSIF
GVLLSSLIYNLLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001061XLOC_001061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002023TCONS_00002023Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018143Folate_rcpt-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018143Folate receptor-likePFAMPF03024Folate_reccoord: 40..219
e-value: 2.0E-43
score: 148.1

Blast
BLAST of TCONS_00002023-protein vs. Swiss-Prot (Human)
Match: FOLR2 (Folate receptor beta OS=Homo sapiens GN=FOLR2 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 7.494e-48
Identity = 90/245 (36.73%), Postives = 127/245 (51.84%), Query Frame = 0
Query:    7 MLSKRMNLILFLGVIFWCAVFVHSSTADDYLNKCISSTNHKNVPGKEGKAMENYHCTPWQNKSCCTWNTTDNIDKDGALSLYNIVWDQCPKIQNMSDKCKQHFKRDTCFYECSPNLGPWIVADTTSKKTRKERVRNVPICKSDCEAWFSDCSEDYTCNDNWATGWDWSKKGTPTMCPKSCKKFKDYFSSAKQFCEKLFDGSFV---YSENNENCMNM---VPVGDNNVKVSEKKAEDLASTAARI 245
            M+ K M L+L L  +   A    +    D LN C+ + +HK  PG E K  +   C+PW+  +CCT +T+  + KD +  LYN  WD C K   M   CK+HF +DTC YECSPNLGPWI     ++  RKER  +VP+CK DC+ W+ DC   +TC  NW  GWDW+           C+ F+ YF +    CE L+  S+    YS  +  C+ M      G+ N +V+   A  +   A  +
Sbjct:    1 MVWKWMPLLLLLVCV---ATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQ--CSPWKKNACCTASTSQELHKDTS-RLYNFNWDHCGK---MEPACKRHFIQDTCLYECSPNLGPWI--QQVNQSWRKERFLDVPLCKEDCQRWWEDCHTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDSAQGNPNEEVARFYAAAMHVNAGEM 234          
The following BLAST results are available for this feature:
BLAST of TCONS_00002023-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOLR27.494e-4836.73Folate receptor beta OS=Homo sapiens GN=FOLR2 PE=1... [more]
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