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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00001950-protein ID=TCONS_00001950-protein|Name=TCONS_00001950-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1254bp
MVRTVLCHPFVEQKNFTDQYDASCICCTNDDKVLIGSLYGSISIIDLKGG
THNVLHKFPSNGIPIKMLFSDDKQFLVSLESKLQDYRVGLSAREMNCQAR
VYSNIMLGNPQKNVAPLSSGYSINRHNNNHTRNKFSVIDFAGLRQPATDI
ALCNSRHNVAISSSKKIYLYAFKEVMSADLPEDDSVLTIDFIRMVEVETT
INIRSVAFSLNWIAFASKTEIRVIQVYLHQPSDEKVYQGEDVSELLDDST
TQTDGLEKTTVSVLTSKPSKSNNMPVQTTLWDFDQATSTSSINEFESKGG
HGMMQMQSIQEEKPYIDTKSSSKEVTGEHTILVGHPLCCSFLGQMPTKEG
HVNYATVTSTTHLYRRFEEDDISFSGNTERIHSLQWLPIFLEDIAEHKQL
EVEEKMPWPWNAFLKPHSFPVLLSMPLFFSTGTHGYLYDTWNSKGLILDY
SYTSDCLSAKHTNSLLYTVTSNGLEIFTSRLYPFVSGCTKEMFKECKFSK
NAEIANKAAGKSKQPYRARDRGPTEIFLETNYFMDYVSVNKDLSMIEDGG
LGPSNDIEPRKRTHSSAYDRYPYQWLLKTCPPKDLETCLVGMYPYQDVVC
VATSMSFVLMFIKVPKRTKEKGGATSSPWSVCSFEKHISTDVGQKITKLI
EESEFSNPMVYYHLLCESHLLLCCDLMSRPNDEILIKALKSSAVSLATFL
MRCEPSFDFTSVKGYFEMAGMQPTAVLEHMNNENIRLERKKHSFGTGMIE
YLNNTLFGKEQVQFDKNICDFIINVYGKNHPSMLAKVILKSNLPRLYSID
LCVKLMSKYKRKKESKEQRLQPLDSLCFAYLHMDLGNPGHAEELLKELEK
DDLLKICISNTEVLFNSQYQLTPMGQLMKKHFKESFQSIVISLFDTRTID
LNNILQIFQAKGKAEDNEKRIPLDRQACQILENLLNDSSRRKSFQEIAVI
LVDQYLLRMTKKMNTNDGWKIKHNHEIKGNGHYGTRFTWLNKLKPFSGES
PSPQDCIILKNNQKSRSNDTSGGTGRKQNDQQSMALSLPSTGLTTSNPSS
PSRSKILSPSSMDDTNHETSKILKSREFCPCCCCSEILIKFQSLLCSRYN
RKEFSLHVIEKLKDSDFVGKEALLLLAWPKAGMAQEAVDYIVANYPALIL
QYAKDMFDWKAQWQQLLQCLLEYIRANKFEPWNYDVYMETLKGVLMRLAR
AFSPKDFLNMLPSDMNVNFMLPYLAECNEFHRSSSLKSQILQTYKTQIEI
HENL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR029438 | Hermansky-Pudlak syndrome 3 protein, C-terminal domain | PFAM | PF14763 | HPS3_C | coord: 1072..1228
e-value: 9.7E-16
score: 58.0 |
| IPR029437 | Hermansky-Pudlak syndrome 3 protein, N-terminal domain | PFAM | PF14761 | HPS3_N | coord: 5..226
e-value: 1.6E-25
score: 89.9 |
| IPR028167 | Hermansky-Pudlak syndrome 3, central region | PFAM | PF14762 | HPS3_Mid | coord: 356..481
e-value: 2.5E-16
score: 59.4
coord: 576..784
e-value: 1.9E-16
score: 59.7 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 1053..1254
e-value: 5.4E-6
score: 25.3 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 8..480
e-value: 2.0E-7
score: 29.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1010..1067 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 21..227 |
Blast
The following BLAST results are available for this feature:
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