TCONS_00001861-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001861-protein
Unique NameTCONS_00001861-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length636

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001861-protein ID=TCONS_00001861-protein|Name=TCONS_00001861-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MLLRKKNSLRNFYQQFQISFQRHYCKNVALPLHNYLDEQIRNFCIIAHVD
HGKSTLADRLLEVTGTIQKDAKNKQVLDKLQVERERGITVKAQTSSMFYK
ANNQKTFLYNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVA
NFYGALDAGLTILPVVNKIDLASADVESCVKQLESVFDFARDEIQLVSAK
EGIGIDKLLEAVHTIIPSPIVEMNQDVSLLLFDSWFDKYRGVVCLMAVKH
GQLNVGDKLQSHFTKESYDVIEMGILHPDEVPVDTLYAGQAGYVVLGIRD
VKKAILGDIYHKYGSNIDEAVSERYTFKQPTPMVFAGAFPSDQSVYENMK
KSIQKLTLNDASVTVHPDSSAALGQGWRLGFLGLLHMDVFKQRLAQEYDT
DVIMTTPNVPYQAVLKGNEDEKITIRSPEDFPEAIQTVALYEPMITGTLI
FPEQYLGKIITLCEQKRGVQLNITYIDDTRIMMKYKLPLNEVVVDFFDKL
KSISSGYASFDYEESGFEETNIEKMEILLNGKSIDALSTIVHRSKVRELG
KSYCFKLKNTIPRQLFEVVIQASVRNKVIARDVVKPVRKDVTAKCYGGDL
TRKRKLLDRQKEGKKRMKKFGKVEVPHEVFLSLLQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000982XLOC_000982Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001861TCONS_00001861Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR005225Small_GTP-bd_dom
IPR000640EFG_V
IPR006297EF-4
IPR013842LepA_GTP-bd_C
IPR031157G_TR_CS
IPR027417P-loop_NTPase
IPR009022EFG_III-V
IPR009000Transl_B-barrel
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 85..93
score: 51.88
coord: 42..55
score: 63.18
coord: 110..120
score: 63.17
coord: 126..137
score: 32.76
coord: 162..171
score: 37.6
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 38..220
score: 57.848
NoneNo IPR availableGENE3D2.40.30.10coord: 227..325
e-value: 3.3E-15
score: 55.5
NoneNo IPR availablePFAMPF00009GTP_EFTUcoord: 39..218
e-value: 4.0E-54
score: 183.0
NoneNo IPR availableGENE3D3.30.70.240coord: 431..591
e-value: 1.3E-27
score: 95.7
NoneNo IPR availableGENE3D3.40.50.300coord: 33..226
e-value: 5.3E-35
score: 119.9
NoneNo IPR availableGENE3D3.30.70.870coord: 326..406
e-value: 2.9E-24
score: 84.4
NoneNo IPR availableCDDcd03709lepA_Ccoord: 442..521
e-value: 5.94444E-44
score: 150.72
NoneNo IPR availableCDDcd03699lepA_IIcoord: 230..312
e-value: 2.00415E-31
score: 116.785
NoneNo IPR availableCDDcd01890LepAcoord: 41..219
e-value: 7.49242E-111
score: 332.191
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 40..212
e-value: 7.2E-21
score: 72.6
IPR000640Translation elongation factor EFG, V domainPFAMPF00679EFG_Ccoord: 440..527
e-value: 3.4E-21
score: 75.0
IPR006297Elongation factor 4TIGRFAMTIGR01393TIGR01393coord: 39..635
e-value: 1.1E-238
score: 791.3
IPR006297Elongation factor 4HAMAPMF_00071LepAcoord: 38..636
score: 220.563
IPR013842GTP-binding protein LepA, C-terminalPFAMPF06421LepA_Ccoord: 529..635
e-value: 1.8E-46
score: 156.6
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 78..93
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..241
IPR009022Elongation factor G, III-V domainSUPERFAMILY54980EF-G C-terminal domain-likecoord: 440..535
IPR009022Elongation factor G, III-V domainSUPERFAMILY54980EF-G C-terminal domain-likecoord: 330..410
IPR009000Translation protein, beta-barrel domainSUPERFAMILY50447Translation proteinscoord: 219..314

Blast
[Close]
BLAST of TCONS_00001861-protein vs. Swiss-Prot (Human)
Match: GUF1 (Translation factor GUF1, mitochondrial OS=Homo sapiens GN=GUF1 PE=1 SV=1)

HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0
Identity = 343/614 (55.86%), Postives = 453/614 (73.78%), Query Frame = 0 
Query:   30 LPLHNYLDEQIRNFCIIAHVDHGKSTLADRLLEVTGTIQKDAKNKQVLDKLQVERERGITVKAQTSSMFYKANNQKTFLYNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYGALDAGLTILPVVNKIDLASADVESCVKQLESVFDFARDEIQLVSAKEGIGIDKLLEAVHTIIPSPIVEMNQDVSLLLFDSWFDKYRGVVCLMAVKHGQLNVGDKLQSHFTKESYDVIEMGILHPDEVPVDTLYAGQAGYVVLGIRDVKKAILGD--IYHKYGSNIDEAVSERYTFKQPTPMVFAGAFPSDQSVYENMKKSIQKLTLNDASVTVHPDSSAALGQGWRLGFLGLLHMDVFKQRLAQEYDTDVIMTTPNVPYQAVL------KGNEDEKITIRSPEDFPEAIQTVALYEPMITGTLIFPEQYLGKIITLCEQKRGVQLNITYIDDTRIMMKYKLPLNEVVVDFFDKLKSISSGYASFDYEESGFEETNIEKMEILLNGKSIDALSTIVHRSKVRELGKSYCFKLKNTIPRQLFEVVIQASVRNKVIARDVVKPVRKDVTAKCYGGDLTRKRKLLDRQKEGKKRMKKFGKVEVPHEVFLSLLQ 635
            L +  +  E IRNF I+AHVDHGKSTLADRLLE+TGTI K   NKQVLDKLQVERERGITVKAQT+S+FY     K +L NLIDTPGHVDFSYEVSRSL+ACQG LLVVDA +G+QAQTVANF+ A +A L+++PV+NKIDL +AD E    Q+E VFD   DE   +SAK G  ++ +L+A+   IP P V     +  L+FDS FD+YRGV+  +A+  G ++ GDK+ S  T+++Y+V E+G+L+P+E P   LYAGQ GY++ G++DV +A +GD    HK      + V     FK   PMVFAG +P DQS Y N+K +I+KLTLND+SVTVH DSS ALG GWRLGFLGLLHM+VF QRL QEY+  VI+TTP VPY+AVL      K + +++ITI +P  FP+  +     EP++ GT+I P++Y GKI+ LCE +R VQ N+ +ID  R+M+KY  PLNE+VVDF+D LKS+SSGYASFDYE++G++   + KM+ILLNG +++ L T+VH+ K   +GK+ C +LK+++PRQLFE+ IQA++ +K+IAR+ VK  RK+V AKCYGGD+TRK KLL RQ EGKK+++K G VEVP + F+ +L+
Sbjct:   58 LDMSRFPVENIRNFSIVAHVDHGKSTLADRLLELTGTIDKTKNNKQVLDKLQVERERGITVKAQTASLFYNCEG-KQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKIDLKNADPERVENQIEKVFDIPSDECIKISAKLGTNVESVLQAIIERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALFDGVVSKGDKIVSAHTQKTYEVNEVGVLNPNEQPTHKLYAGQVGYLIAGMKDVTEAQIGDTLCLHK------QPVEPLPGFKSAKPMVFAGMYPLDQSEYNNLKSAIEKLTLNDSSVTVHRDSSLALGAGWRLGFLGLLHMEVFNQRLEQEYNASVILTTPTVPYKAVLSSSKLIKEHREKEITIINPAQFPDKSKVTEYLEPVVLGTIITPDEYTGKIMMLCEARRAVQKNMIFIDQNRVMLKYLFPLNEIVVDFYDSLKSLSSGYASFDYEDAGYQTAELVKMDILLNGNTVEELVTVVHKDKAHSIGKAICERLKDSLPRQLFEIAIQAAIGSKIIARETVKAYRKNVLAKCYGGDITRKMKLLKRQAEGKKKLRKIGNVEVPKDAFIKVLK 664
The following BLAST results are available for this feature:
BLAST of TCONS_00001861-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GUF10.000e+055.86Translation factor GUF1, mitochondrial OS=Homo sap... [more]
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