TCONS_00001703-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001703-protein
Unique NameTCONS_00001703-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length541

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001703-protein ID=TCONS_00001703-protein|Name=TCONS_00001703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MNTVVTSEYLPTPFHGGRVGGGSVPNTSTNDLSTENTFRWPHAAISGERT
SPVAITTNGYNFLTDRTIPTGAPTTNTDASGVHRFTVSTDPYKFTPYDSA
IPPSTAHQQDFQRFDPYGNQFRNAANFYRKSDLNAQEQVNVSMTLPPDTR
GYPTPPNQTVANLSQPPLPSATLNQPPPSAFQNTMSTTGFQTPPTYKPEL
RMDFHDDANRPRSYSQPNYVDNNFIPTPHHHMMEGARPTSTGLMGGEMMQ
QPKQDQSPENSTKNEVQKIMQQQMNKTESKTPEKTQDVKNEPISKDNTTK
TGTNNGQPQTENGLPSYTAMIAQAILKKESSKSTLSDIYEYMEKHFPSLE
KRGTGWRNCVRHTLSLNDCFIKLHRPENGRSCNWAIHPTYYESFSKGDYR
KRRALRKRPRGLQWIDPVMLAGYQFAREHDVYPEMHQQPSPFYHYPPHPA
TAPPATNMHPGSPQGYYHSSSVGNFNQNFSAPPSTHLQQPPAGIQHYSPH
QNYAGPPQPGTSGHHHMSNAPHCTNPDCYCQFSKQTRTYTP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000890XLOC_000890Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001703TCONS_00001703Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 333..350
score: 36.2
coord: 356..373
score: 61.24
coord: 312..325
score: 39.46
IPR001766Fork head domainSMARTSM00339forkneu4coord: 310..398
e-value: 1.4E-18
score: 77.7
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 316..394
e-value: 3.8E-24
score: 84.7
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 316..404
score: 22.272
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 294..397
e-value: 3.3E-26
score: 90.8
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 316..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..518

Blast
[Close]
BLAST of TCONS_00001703-protein vs. Swiss-Prot (Human)
Match: FOXI1 (Forkhead box protein I1 OS=Homo sapiens GN=FOXI1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.655e-17
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:  316 SYTAMIAQAILKKESSKSTLSDIYEYMEKHFPSLEKRGTGWRNCVRHTLSLNDCFIKLHRPEN--GRSCNWAIHPTYYESFSKGDYRKRR 403
            SY+A+IA AI      + TLS IY+Y+  +FP   K   GW+N +RH LSLNDCF K+ R E+  G+   W + P   + F  G++R++R
Sbjct:  127 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKR 216
The following BLAST results are available for this feature:
BLAST of TCONS_00001703-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXI11.655e-1742.22Forkhead box protein I1 OS=Homo sapiens GN=FOXI1 P... [more]
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