TCONS_00001639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001639-protein
Unique NameTCONS_00001639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001639-protein ID=TCONS_00001639-protein|Name=TCONS_00001639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=115bp
MSLPGGSATATMSAQMAQASLEKDFDFPQLVFDMISAVESSKEPKDELLK
KVVLFKQKMNQCKELLKKMPGLDQSPEEQLRSLKQYQEELEKKKEALEKL
KYLDVFTSAAVKKEP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000853XLOC_000853Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001639TCONS_00001639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011425Med9
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0001104RNA polymerase II transcription cofactor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0016592 mediator complex
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..103
NoneNo IPR availableSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 43..102
IPR011425Mediator of RNA polymerase II transcription subunit 9PFAMPF07544Med9coord: 27..101
e-value: 1.7E-13
score: 50.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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