TCONS_00001576-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001576-protein
Unique NameTCONS_00001576-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length514

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001576-protein ID=TCONS_00001576-protein|Name=TCONS_00001576-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
SPSKTIATFEIPTKFNMSALCSARLLTRVSGKFTNSTSIARSLFTNSIKM
SSGFRIETDTLGEVEVPNDKYYGAQTVRSTRNFPIGDETERMPMPVIKAF
GILKKAAAEVNTEFGLDANIAKQISLACDEVIDGKLKDHFPLVIWQTGSG
TQSNMNCNEVISNRANEMLGAELGTKSPVHPNDHVNKSQSSNDTFPTAMH
IAVGQMVNETLLPGMKKLHQALLEKTEEFKDIVKIGRTHTQDATPLTLGQ
EFGGYATQMEYGIKRIEAALPRVYELAIGGTAVGTGLNTRIGFAEKMSAK
IAEFTGLPYESAPNKFEALAAHDAMVEISGAMNVVACSIMKIANDIRFLG
SGPRCGLGELLLPENEPGSSIMPGKVNPTQCEAITMVAAQVMGNHVAVSV
GGSNGHFELNVFKPMMVKNVLQSARLLGDSCVAFTDNCVVDIIANRERID
KLLHESLMLVTALNTHIGYDKAAKIAKTAHKNGSTLKATAIELGYLTEEE
FDAWVRPEDMLGPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000823XLOC_000823Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001576TCONS_00001576Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000362Fumarate_lyase_fam
IPR022761Fumarate_lyase_N
IPR018951Fumarase_C_C
IPR024083Fumarase/histidase_N
IPR005677Fum_hydII
IPR020557Fumarate_lyase_CS
IPR008948L-Aspartase-like
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0006106fumarate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0004333fumarate hydratase activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0045239tricarboxylic acid cycle enzyme complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006106 fumarate metabolic process
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0045239 tricarboxylic acid cycle enzyme complex
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004333 fumarate hydratase activity
molecular_function GO:0016829 lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000362Fumarate lyase familyPRINTSPR00149FUMRATELYASEcoord: 185..203
score: 40.92
coord: 322..349
score: 31.99
coord: 231..249
score: 55.26
coord: 368..384
score: 66.74
NoneNo IPR availableGENE3D1.20.200.10coord: 190..468
e-value: 5.0E-91
score: 304.4
NoneNo IPR availableGENE3D1.10.40.30coord: 469..513
e-value: 5.4E-27
score: 93.5
NoneNo IPR availableCDDcd01362Fumarase_classIIcoord: 55..510
e-value: 0.0
score: 898.016
IPR022761Fumarate lyase, N-terminalPFAMPF00206Lyase_1coord: 62..393
e-value: 2.0E-118
score: 395.3
IPR018951Fumarase C, C-terminalPFAMPF10415FumaraseC_Ccoord: 459..511
e-value: 1.7E-25
score: 89.1
IPR024083Fumarase/histidase, N-terminalGENE3D1.10.275.10coord: 52..189
e-value: 4.5E-64
score: 214.4
IPR005677Fumarate hydratase, class IITIGRFAMTIGR00979TIGR00979coord: 54..512
e-value: 7.6E-230
score: 761.3
IPR005677Fumarate hydratase, class IIHAMAPMF_00743FumaraseCcoord: 54..513
score: 88.312
IPR020557Fumarate lyase, conserved sitePROSITEPS00163FUMARATE_LYASEScoord: 368..377
IPR008948L-Aspartase-likeSUPERFAMILY48557L-aspartase-likecoord: 54..511

Blast
[Close]
BLAST of TCONS_00001576-protein vs. Swiss-Prot (Human)
Match: FUMH (Fumarate hydratase, mitochondrial OS=Homo sapiens GN=FH PE=1 SV=3)

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 369/471 (78.34%), Postives = 414/471 (87.90%), Query Frame = 0 
Query:   46 NSIKMSS--GFRIETDTLGEVEVPNDKYYGAQTVRSTRNFPIGDETERMPMPVIKAFGILKKAAAEVNTEFGLDANIAKQISLACDEVIDGKLKDHFPLVIWQTGSGTQSNMNCNEVISNRANEMLGAELGTKSPVHPNDHVNKSQSSNDTFPTAMHIAVGQMVNETLLPGMKKLHQALLEKTEEFKDIVKIGRTHTQDATPLTLGQEFGGYATQMEYGIKRIEAALPRVYELAIGGTAVGTGLNTRIGFAEKMSAKIAEFTGLPYESAPNKFEALAAHDAMVEISGAMNVVACSIMKIANDIRFLGSGPRCGLGELLLPENEPGSSIMPGKVNPTQCEAITMVAAQVMGNHVAVSVGGSNGHFELNVFKPMMVKNVLQSARLLGDSCVAFTDNCVVDIIANRERIDKLLHESLMLVTALNTHIGYDKAAKIAKTAHKNGSTLKATAIELGYLTEEEFDAWVRPEDMLGPK 514
            N+ +M+S   FRIE DT GE++VPNDKYYGAQTVRST NF IG  TERMP PVIKAFGILK+AAAEVN ++GLD  IA  I  A DEV +GKL DHFPLV+WQTGSGTQ+NMN NEVISNRA EMLG ELG+K PVHPNDHVNKSQSSNDTFPTAMHIA    V+E LLPG++KLH AL  K++EF  I+KIGRTHTQDA PLTLGQEF GY  Q++Y + RI+AA+PR+YELA GGTAVGTGLNTRIGFAEK++AK+A  TGLP+ +APNKFEALAAHDA+VE+SGAMN  ACS+MKIANDIRFLGSGPR GLGEL+LPENEPGSSIMPGKVNPTQCEA+TMVAAQVMGNHVAV+VGGSNGHFELNVFKPMM+KNVL SARLLGD+ V+FT+NCVV I AN ERI+KL++ESLMLVTALN HIGYDKAAKIAKTAHKNGSTLK TAIELGYLT E+FD WV+P+DMLGPK
Sbjct:   40 NAARMASQNSFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 510
The following BLAST results are available for this feature:
BLAST of TCONS_00001576-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUMH0.000e+078.34Fumarate hydratase, mitochondrial OS=Homo sapiens ... [more]
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