TCONS_00001520-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001520-protein
Unique NameTCONS_00001520-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001520-protein ID=TCONS_00001520-protein|Name=TCONS_00001520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MSEENIAKDIPLFLSAMNSLKTITKDSDAHIKGLMEKISTSEEDRNDGLS
FLEMKFHLVLDYLINLTFTMILKINGKSLVEQPCIDRLVEIRTVLEKIRP
INKKLSYQVDKLIKMASEAVEGQANPLSFKPNLNNLVNKDEEDSEGSEEE
DGHKKDEVYVPPRVTAVPYDEEEDKQKKKMEKARQKSLNNALLQDLRNEY
SEAPEEIRSGRNGNMRAKLQKKEEERQRFEEDNFRRLTVTKKDRLMKRKL
NDLDTVVKLDSFHGAGDDDSDSDMGDDRYNPKKKKGKGKKDKFKKKISGG
SSGKKRRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000779XLOC_000779Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001520TCONS_00001520Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007146Sas10/Utp3/C1D
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..233
IPR007146Sas10/Utp3/C1DPFAMPF04000Sas10_Utp3coord: 19..97
e-value: 5.8E-16
score: 58.8

Blast
BLAST of TCONS_00001520-protein vs. Swiss-Prot (Human)
Match: NGDN (Neuroguidin OS=Homo sapiens GN=NGDN PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.180e-46
Identity = 99/292 (33.90%), Postives = 177/292 (60.62%), Query Frame = 0
Query:    9 DIPLFLSAMNSLKTITKDSDAHIKGLMEKISTSEEDRNDGLSFLEMKFHLVLDYLINLTFTMILKINGKSLVEQPCIDRLVEIRTVLEKIRPINKKLSYQVDKLIKMASEAVEGQANPLSFKPNLNNLVNK-----------DEEDSEGSEEEDGHKKDEVYVPPRVTAVPYDE-EEDKQKKKMEKARQKSLNNALLQDLRNEYSEAPEEIRSGRNGNMRAKLQKKEEERQRFEEDNFRRLTVTKKDRLMKRKLNDLDTVVK-LDSFHGAGDDDSDSDMGDDRYNPKKKKGK 287
            D+P  ++ + +L+       A +K L +K+         GLSFLE+K  L+L YL++LT  ++ K +G SL     + RLVEIRTVLEK+RP+++KL YQ+DKLIK A      + +PL FKP+ +N+++K           +++ SE S ++      + YVPPR+  V YDE E +++KK++E+A++++L+++++++L+ +YS+APEEIR  R+ ++  + Q +++ R  +EE    RL+V+K+++  +++ N + + +  L  F         +   D+  NP KK+ K
Sbjct:   10 DLPSAVTLLKNLQEQVMAVTAQVKSLTQKVQAGAYPTEKGLSFLEVKDQLLLMYLMDLTHLILDKASGGSLQGHDAVLRLVEIRTVLEKLRPLDQKLKYQIDKLIKTAVTGSLSENDPLRFKPHPSNMMSKLSSEDEEEDEAEDDQSEASGKKSVKGVSKKYVPPRLVPVHYDETEAEREKKRLERAKRRALSSSVIRELKEQYSDAPEEIRDARHPHVTRQSQ-EDQHRINYEESMMVRLSVSKREKGRRKRANVMSSQLHSLTHFSDISALTGGTVHLDEDQNPIKKRKK 300          
The following BLAST results are available for this feature:
BLAST of TCONS_00001520-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NGDN8.180e-4633.90Neuroguidin OS=Homo sapiens GN=NGDN PE=1 SV=1[more]
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