TCONS_00001517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001517-protein
Unique NameTCONS_00001517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001517-protein ID=TCONS_00001517-protein|Name=TCONS_00001517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MEQFDACSSCKHSKKGTPYDQSLDEMEFQRGIWQAAIDNDINKIKRQYLN
GTDINSVDSSGYTALHYASRNGHNEIVNLLIGYGACVNCVTKAGKDTPLH
RAVYVGNLDIVRLLISAGASIRQQNVDGQTSLHKAVQRNHTDVVRYLLKM
DSEIQTVKDNKSKLPIDYSSSEEMTNLLKIYKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000776XLOC_000776Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001517TCONS_00001517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 61..76
score: 45.04
coord: 110..124
score: 37.43
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 127..156
e-value: 0.0044
score: 26.2
coord: 94..123
e-value: 5.7E-5
score: 32.5
coord: 60..89
e-value: 2.0E-6
score: 37.4
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 127..150
e-value: 9.4E-4
score: 19.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 127..159
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 13.143
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 94..126
score: 12.583
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 16..182
e-value: 2.3E-40
score: 137.3
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 34..125
e-value: 8.1E-17
score: 61.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 35..183
score: 36.552
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 32..179
NoneNo IPR availableCDDcd00204ANKcoord: 35..148
e-value: 3.34794E-34
score: 118.255

Blast
[Close]
BLAST of TCONS_00001517-protein vs. Swiss-Prot (Human)
Match: ANR39 (Ankyrin repeat domain-containing protein 39 OS=Homo sapiens GN=ANKRD39 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.969e-42
Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 0 
Query:   10 CKHSKKGTPYDQSLDEMEFQRGIWQAAIDNDINKIKRQYLNGTDINSVDSSGYTALHYASRNGHNEIVNLLIGYGACVNCVTKAGKDTPLHRAVYVGNLDIVRLLISAGASIRQQNVDGQTSLHKAVQRNHTDVVRYLLKMDSEIQTVKDNKSKLPID 167
            C H        Q+L+EM+F+RGIW AA++ D+ ++K       D +  DS+GYTALHYASRNGH  +   L+  GA  +  T  G  T LHRA Y G+ +I RLL+S G++ R  + DG TSLHKA +R H D+   LL+    ++ ++D K++L  D
Sbjct:   13 CSHPSAVLGVQQTLEEMDFERGIWSAALNGDLGRVKHLIQKAEDPSQPDSAGYTALHYASRNGHYAVCQFLLESGAKCDAQTHGGA-TALHRASYCGHTEIARLLLSHGSNPRVVDDDGMTSLHKAAERGHGDICSLLLQHSPALKAIRDRKARLACD 169
The following BLAST results are available for this feature:
BLAST of TCONS_00001517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR395.969e-4242.41Ankyrin repeat domain-containing protein 39 OS=Hom... [more]
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