TCONS_00001505-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001505-protein
Unique NameTCONS_00001505-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001505-protein ID=TCONS_00001505-protein|Name=TCONS_00001505-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MNTIPSMVRSQKFRIKTFQTSFQCWRGILQKRRFLTGCSNPRTSTSQRQF
LYRINPIISKSRSITTALQERHKTVLLYLSSAAVLACGLSYAAVPLYRLY
CQASGYGSAQQEIDFGSKIESMERVEDRILTVRFEAGTSKTLRWKFKPQQ
KEVNLAPGETALAFYTAVNLTDDPIIGIATYNVIPFEAGQYFNKIQCFCF
EEQQLNPGEEVDMPVFFYIDPDFMEDPKLAKYDELILSYTFFQSNEANAP
GSSPHVARQPPPPPPPSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000765XLOC_000765Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001505TCONS_00001505Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023471CtaG/Cox11_dom
IPR007533Cyt_c_oxidase_assmbl_CtaG
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005507 copper ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domainGENE3D2.60.370.10coord: 122..248
e-value: 5.0E-56
score: 187.6
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domainSUPERFAMILY110111Ctag/Cox11coord: 120..246
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11PFAMPF04442CtaG_Cox11coord: 93..243
e-value: 1.3E-59
score: 200.5
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11HAMAPMF_00155CtaGcoord: 58..249
score: 34.327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268

Blast
[Close]
BLAST of TCONS_00001505-protein vs. Swiss-Prot (Human)
Match: COX11 (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo sapiens GN=COX11 PE=1 SV=3)

HSP 1 Score: 235.343 bits (599), Expect = 2.952e-77
Identity = 108/188 (57.45%), Postives = 139/188 (73.94%), Query Frame = 0 
Query:   61 SRSITTALQERHKTVLLYLSSAAVLACGLSYAAVPLYRLYCQASGYGSAQQEIDFGSKIESMERVEDRILTVRFEAGTSKTLRWKFKPQQKEVNLAPGETALAFYTAVNLTDDPIIGIATYNVIPFEAGQYFNKIQCFCFEEQQLNPGEEVDMPVFFYIDPDFMEDPKLAKYDELILSYTFFQSNEAN 248
            +R+     + ++KT L Y+++ AV   G SYAAVPLYRLYCQ +G G +        KIE+M  V+DRI+ + F A    +L+W F+PQQ E+ + PGETALAFY A N TD P+IGI+TYN++PFEAGQYFNKIQCFCFEEQ+LNP EEVDMPVFFYIDP+F EDP++ K D + LSYTFF++ E +
Sbjct:   81 TRAQEEERRRQNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSAVAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRPQQTEIYVVPGETALAFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFFYIDPEFAEDPRMIKVDLITLSYTFFEAKEGH 268
The following BLAST results are available for this feature:
BLAST of TCONS_00001505-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COX112.952e-7757.45Cytochrome c oxidase assembly protein COX11, mitoc... [more]
back to top