TCONS_00001480-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001480-protein
Unique NameTCONS_00001480-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001480-protein ID=TCONS_00001480-protein|Name=TCONS_00001480-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
FSSWNSFFLFRENLYYRIMFFVAIFTTLLTATPSNAGDIVSILERLSIST
EGIEFPHCALTKEFLSTANSVYGCERVIQQYPICNKSLVVAYSELEPLVY
RNTSGEVVGILPDILQETLIKRCCLGCNKLEFLPPKDFMKKFTDQLVSDN
NTIHKADIIIPAEHIDGKREIVLSHHFSKLTKFESIYFIAKTKSTGTKEL
VYTLFTSALKSWPLFVIALIMAVCAGTIIWLSDMWKNKEQFPRGFPQGPF
EGFWWAYVSMTTVGYGDRTPSTIFGRLFAVVWILIGITIFNMFTATITSA
LNKELLDRITYSPQDKDIGMIANLKVVENAILKNYATPKAFDNMEKLLEA
LKTESINAIAIDDIAYKKYYPTIRPPFAVQLELPVNGYSIGFACNNITLK
KMQDTFNRNSMEILRLPTNTKPIDFQSQLHVPNDMPEITKVFSIKNKIFV
VTIGTVIGISVLGVIAGILANRCNKKSKSHKKKNKDRIELVAQD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000753XLOC_000753Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001480TCONS_00001480Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
IPR013099K_chnl_dom
IPR001638Solute-binding_3/MltF_N
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 217..484
e-value: 7.2E-7
score: 29.0
NoneNo IPR availableGENE3D1.10.287.70coord: 207..492
e-value: 8.2E-23
score: 80.0
NoneNo IPR availableGENE3D3.40.190.10coord: 84..206
e-value: 0.015
score: 14.5
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 193..303
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 86..201
coord: 312..396
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 219..301
e-value: 4.6E-15
score: 55.2
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 88..395
e-value: 2.0E-6
score: 27.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001480-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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