TCONS_00001410-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001410-protein
Unique NameTCONS_00001410-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001410-protein ID=TCONS_00001410-protein|Name=TCONS_00001410-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MEDSVKMNYLTIEKNIEYRISSGSDISPGPSPPGSPKTQTKTRGGWAKIK
RELITSKGERNKDKEKFDENSPSSTPEMRPVNTLPKSPHLQSKRNPDQYF
DQNNNGSTFTGYNQTGILSQNNNHLNTSYLMAPGGMDKRKCVKLLMLGQD
GVGKSAFVVRYLTRRYIGEYDPKIEGIFRKTVNMNNQDINVEIKDTSRGI
NWSGRANDLIWTNGLICVYSINNRSSFNEIQSISKMLLQQKKSRGIPCLL
IGNKKDLEKNERRVQVSEGQQLADSINGTFCELSVSDGYIELENIVNKFI
KDKCSDLKNHLLPQSKILSSKSTPEIRKPLGGGQGGSNDGGGVDIEVKTE
KKTRALWQKLLTNNNKKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000747XLOC_000747Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001410TCONS_00001410Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 142..163
score: 38.43
coord: 244..257
score: 46.59
coord: 165..181
score: 21.81
coord: 182..204
score: 18.04
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 139..299
e-value: 2.5E-22
score: 90.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 142..302
e-value: 1.1E-8
score: -1.1
NoneNo IPR availableGENE3D3.40.50.300coord: 135..310
e-value: 9.0E-24
score: 83.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..99
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 143..289
e-value: 7.6E-27
score: 93.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 140..287
e-value: 5.4E-13
score: 47.0
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 137..361
score: 16.558
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 141..289

Blast
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BLAST of TCONS_00001410-protein vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.194e-32
Identity = 64/195 (32.82%), Postives = 108/195 (55.38%), Query Frame = 0 
Query:  136 MDKRKCVKLLMLGQDGVGKSAFVVRYLTRRYIGEYDPKIEGIFRKTVNMNNQDINVEIKDTSRGINWSGRANDLIWTNGLICVYSINNRSSFNEIQSISKMLLQQKKSRGIPCLLIGNKKDLEKNERRVQVSEGQQLADSINGTFCELSVSDGYIELENIVNKFIKDKCSDLKNHLLPQSKILSSKSTPEIRKPL 330
            M K   VKL + G+ GVGKSA VVR+LT+R+I EYDP +E  +R    ++++ +++EI DT+   +   R   + W  G + VY I +R SF E+  +  +L + KK + +  +L+GNK DL+ + R+V   EG++LA  +   F E S   G    E  + +   + C +++   + Q K     ST  +++ +
Sbjct:    1 MAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLD-HSRQVSTEEGEKLATELACAFYECSACTG----EGNITEIFYELCREVRRRRMVQGKTRRRSSTTHVKQAI 190
The following BLAST results are available for this feature:
BLAST of TCONS_00001410-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RERG1.194e-3232.82Ras-related and estrogen-regulated growth inhibito... [more]
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