TCONS_00001342-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001342-protein
Unique NameTCONS_00001342-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001342-protein ID=TCONS_00001342-protein|Name=TCONS_00001342-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MFRTVFLGILCIYWCECSKQIWNHAAIGKAYAWQPFYEVSLMDERQCFGQ
CVYNEKCLSFEVYQTVPRKVECRLFDFVYEYYTKFKELDMKVGSKIYSKP
LEKVCTTCKSCLDYSKKGHLKNGVYEVDLLGTRRDVYCFMEGEGGGWMAF
QRRYDGSVSFEDKEWAEYKDGFGDGSGEYWLGLETLHQLTSTQSYDLYAR
AMDFSGVWESKRFAGFTIGSELMERYKFDFQSIYSGTQYSNHSLFERAKG
MKFSTPTRDNDLYTPIPTCAIRFPGGWWFSDCHYDFMNGAYSQQEACDRA
TGIHWYKRFGNNHNKCLKETLLMIREN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000723XLOC_000723Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001342TCONS_00001342Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 106..327
e-value: 1.3E-25
score: 101.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 108..325
e-value: 4.5E-44
score: 150.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 102..327
score: 33.881
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 105..326
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 69..251
e-value: 1.3E-40
score: 138.9
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 252..318
e-value: 7.6E-16
score: 57.5

Blast
[Close]
BLAST of TCONS_00001342-protein vs. Swiss-Prot (Human)
Match: FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.542e-32
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 0 
Query:  106 TTCKSCLDYSKKGHLKNGVYEVDLLGTRR-DVYCFMEGEGGGWMAFQRRYDGSVSFEDKEWAEYKDGFGDGSGEYWLGLETLHQLTSTQSYDLYARAMDFSGVWESKRFAGFTIGSELMERYKFDFQSIYSGTQYSNHSLFERAKGMKFSTPTRDNDLYTPIPTCAIRFPGGWWFSDCHYDFMNGAYSQQEACDRATGIHWYKRFGNNHNKCLKETLLMIR 325
            T  ++C D   +GH  +G + + L   R   V C M+ +GGGW  FQRR DGSV F  ++WA YK GFG   GE+WLG + +H LT+  + +L    +DF   ++  ++  F +  E  E+Y     +   G+   + +         FST  +DNDL T    CA+ F G WW+ +CH   +NG Y +      A GI+W  + G  +N   K + + +R
Sbjct:  100 TGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFY-RDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADE-AEKYNLVLGAFVEGSAGDSLTFHNN---QSFSTKDQDNDLNT--GNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINW--KSGKGYNYSYKVSEMKVR 311
The following BLAST results are available for this feature:
BLAST of TCONS_00001342-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN21.542e-3233.48Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2[more]
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