TCONS_00001334-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001334-protein
Unique NameTCONS_00001334-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length876

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001334-protein ID=TCONS_00001334-protein|Name=TCONS_00001334-protein|organism=Clytia hemisphaerica|type=polypeptide|length=876bp
MPTAGGANNSGVRGFFTNFANYTGEKVSEVKELLFGVNIDDSVELASLTS
RQSNSFRSRNGGNHDILKRKTLIPDELQHEDIYEQYAEYDCSRNLVVSST
TLFRKGPIPIEHLSHQEQNRLSKRGCLLEWNDAQRQTSDNHLPYIDPSSK
SLLTYFARMGSGEDDTDVVNLAFVESLLNAGASMNYPDVYGQSIFFAVVR
DWHIDVARFAIEKGADVNHRDQYGRTPLHLAAAVNYEEMVAFIIANGADI
TAKTEGEEQTPLHYAARYDSVEAMKVLIQAGAMIDGVDFLNRTPLHVAAE
TGSHEVVKFLMKLGAPTGVYDSFGNSVMFMMIEKMPHLAYEGLNQFFVED
NAMRRRYYYLDHLEFDVKSNVSSKNARNVLEAIVMYKEVDLMMHPSIKKL
LSIKWKLYGKRRAIISNLGNVFHTLLATILIFAIPYRPYDQQFTPVKDNI
IFITLAMLFVVLTFFFWIKQILTIRLLNAKDQAYKEHRFNYIKKQLPHCH
PRWTEEKEFLEKEIERIKSYKSTFWQDYWNIFEWVSLLFVVIMFALHITN
IVSPNMKVYRAANFVSAITLLLVWFRLYKTLRIARFFSEINVLLTNVALE
TCRFVILYMDLYIPYIFVFFMLFGGSTKLFGNTKKNIDENHFELEQFSDV
LYYGWLVMLGKHFPEEGGTAVNHVALELFLGSYIVISTLLGFIYIGRLSE
LFSRVYKKVNAKSXFIYIGRLSELFSRVYKKVNAKSNLLVAGVLVTEEKY
LSQNQLRANKKHMRRLCGPMVVPFESNKGVEDDDQNIGIGIEHVTSKIED
VTNYLRKANFPREERQSINVDQLTVLETELERIFQSMSESERLLTENKEN
VKTAQTKTIDLIKETIETRKTNANRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000720XLOC_000720Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001334TCONS_00001334Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 223..252
e-value: 8.2E-6
score: 35.3
coord: 290..321
e-value: 0.0012
score: 28.1
coord: 190..219
e-value: 180.0
score: 10.5
coord: 257..286
e-value: 0.0051
score: 26.0
coord: 148..186
e-value: 680.0
score: 6.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 257..289
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 290..322
score: 12.502
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 190..222
score: 8.656
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 223..255
score: 13.384
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 248..345
e-value: 1.6E-22
score: 79.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 126..230
e-value: 3.0E-18
score: 65.1
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 257..315
e-value: 1.7E-11
score: 44.4
coord: 172..253
e-value: 7.1E-10
score: 39.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 170..322
score: 45.095
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 171..331
NoneNo IPR availableGENE3D1.10.287.70coord: 402..707
e-value: 7.6E-7
score: 28.2
NoneNo IPR availableGENE3D2.40.10.190coord: 231..247
e-value: 1.1E-5
score: 25.1
NoneNo IPR availableCDDcd00204ANKcoord: 185..311
e-value: 6.11785E-34
score: 126.344
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 422..707
e-value: 5.3E-6
score: 25.7

Blast
[Close]
BLAST of TCONS_00001334-protein vs. Swiss-Prot (Human)
Match: ANR28 (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=5)

HSP 1 Score: 88.1965 bits (217), Expect = 1.091e-17
Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 0 
Query:  171 LAFVESLLNAGASMNYPDVYGQSIFFAVVRDWHIDVARFAIEKGADVNHRDQYGRTPLHLAAAVNYEEMV-AFIIANGADITAKTEGEEQTPLHYAARYDSVEAMKVLIQAGAMIDGVDFLNRTPLHVAAETGSHEVVKFLMKLGAPT---GVYDSF 323
            ++ V+ LL+ G  MN P+ YG +       +    V    I+ GA VN +++ G TPLH AAA  +  +    ++ NGAD+  K++ + +TPLH  A +      + +IQ+GA+ID  D    TPLH+AA  G   ++  L+  GA T   G++  F
Sbjct:  219 ISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNELIDCGAIVNQKNEKGFTPLHFAAASTHGALCLELLVGNGADVNMKSK-DGKTPLHMTALHGRFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMF 374
The following BLAST results are available for this feature:
BLAST of TCONS_00001334-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR281.091e-1733.76Serine/threonine-protein phosphatase 6 regulatory ... [more]
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