TCONS_00001218-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001218-protein
Unique NameTCONS_00001218-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length821

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001218-protein ID=TCONS_00001218-protein|Name=TCONS_00001218-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
MAERFYVRGNMPRTAVEMYTKVNKYEAAYKLAVRCMDSDDVSKLYIAQAE
QLEAQGRFKEAEKLYIMIEEGDLAINMYKRAKMYDQMIKLVKEYHGDLIT
DTHLHLAKELESEGQLSTAEHHYLEVGDWKACVNMYRSNELWEDAYRIAK
QSGTPGSGKQVAYLWAKSLGGDSAIKLLQKLGLLEACIDYAIDTTSFDFA
FDLARTLKREKVMEIHLKKAMFLEDEGRFNDAEDEFIKAEKPKEAVLMYI
HQSDWDEARRVAESYDPESLVDVLIGQARLSFEKKDYTEGESFLLRAQRP
ELAIKFYKECQRWPDVLRIAKEYVPHQLAALQDEYDRIATQSGGDKGAEG
IIAQARDWETRAEYNRAIDLYMRITQDMAGNSAVIEEVYTKALELAIKFS
KDRALSVAHEVCKRLLEMQAYETASDLYQAVKLYREAISACVKGDLWTQA
RSIARDYAPKYEEHVEEEYVKYLKKKNKTDELINVDVIAALDMYVEQGLW
DKCIQEAEQQSFEVLSKYVALYAANLIKDGDQVKALRLFVEHGAPANPQN
FNIYKRLVEDLFAKQGLSGENAYKVWADLRTMLYDLCDGFNKKPTNPAVM
DIFNRMLLVAHYYAIRSAITKNSQLEVLHAKISVSLLRYCDLIPCDKAFY
EAGIHCKGVGWENMAFVFLNRYLDLSEGIEDGNLDAIDNTDIMDTDIPLE
VPLPETQYLNEEQREEVKEWVLAVSMDQRVEQTLSFDERNVYEASLTSPE
SDVVCLPCVVTGYPVLRNKMEFNKTGKAANKEDWNKFAMATKVSHSADCQ
DVLRFLSLWCGTSGNQAFSFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000660XLOC_000660Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001218TCONS_00001218Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 211..542
e-value: 2.7E-8
score: 32.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1..210
e-value: 2.9E-9
score: 36.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..194

Blast
[Close]
BLAST of TCONS_00001218-protein vs. Swiss-Prot (Human)
Match: IF172 (Intraflagellar transport protein 172 homolog OS=Homo sapiens GN=IFT172 PE=1 SV=2)

HSP 1 Score: 960.674 bits (2482), Expect = 0.000e+0
Identity = 446/822 (54.26%), Postives = 614/822 (74.70%), Query Frame = 0 
Query:    1 MAERFYVRGNMPRTAVEMYTKVNKYEAAYKLAVRCMDSDDVSKLYIAQAEQLEAQGRFKEAEKLYIMIEEGDLAINMYKRAKMYDQMIKLVKEYHGDLITDTHLHLAKELESEGQLSTAEHHYLEVGDWKACVNMYRSNELWEDAYRIAKQSGTPGSGKQVAYLWAKSLGGDSAIKLLQKLGLLEACIDYAIDTTSFDFAFDLARTLKREKVMEIHLKKAMFLEDEGRFNDAEDEFIKAEKPKEAVLMYIHQSDWDEARRVAESYDPESLVDVLIGQARLSFEKKDYTEGESFLLRAQRPELAIKFYKECQRWPDVLRIAKEYVPHQLAALQDEYDRIATQSGGDKGAEGIIAQARDWETRAEYNRAIDLYMRITQDMAGNSAVIEEVYTKALELAIKF-SKDRALSVAHEVCKRLLEMQAYETASDLYQAVKLYREAISACVKGDLWTQARSIARDYAPKYEEHVEEEYVKYLKKKNKTDELINVDVIAALDMYVEQGLWDKCIQEAEQQSFEVLSKYVALYAANLIKDGDQVKALRLFVEHGAPANPQNFNIYKRLVEDLFAKQGLSGENAYKVWADLRTMLYDLCDGFNKKP-TNPAVMDIFNRMLLVAHYYAIRSAITKNSQLEVLHAKISVSLLRYCDLIPCDKAFYEAGIHCKGVGWENMAFVFLNRYLDLSEGIEDGNLDAIDNTDIMDTDIPLEVPLPETQYLNEEQREEVKEWVLAVSMDQRVEQTLSFDERNVYEASLTSPESDVVCLPCVVTGYPVLRNKMEFNKTGKAANKEDWNKFAMATKVSHSADCQDVLRFLSLWCGTSGNQAFSF 820
            +AE  Y +G+  + A++MYT+  ++E A+KLA++CM  +DVS LYI QA+++E QG+++EAE+LY+ ++E DLAI MYK+ K+YD MI+LV ++H DL++DTHLHL KELE+EG+L  AE+HYLE  +WKA VNMYR++ LWE+AYR+A+  G   + K VAYLWAKSLGG++A++LL KLGLLEA +D+A D  SF+FAF+L+R   + K  E+HLK AMFLEDEG+F +AE EFI+A KPKEAVLM++H  DW+ A+RVAE++DP+S+ +VL+GQAR + E+KD+ + E  LLRAQRP LA+ +YKE   W D LRI K+YVP QL ALQ+EY+R AT+ G  +G EG + QAR WE   EY+RA+D Y+++    +GNS + E+ + KA EL+IKF    R + V   V  +L+ +  +  A++LY  + L +EAI A ++G+ W +A+ +A++  P+YE++V++ Y ++LK + K D L+ VDVIAALD+YVEQG WDKCI+ A +Q++++L KYVALYA +LI++G   +AL L+V+HGAPANPQNFNIYKR+  D+ +  G +   AY  WADLR +L++LC+   K    N    + F  MLL+AHYYA RSA     QLE + A++SVSLLR+  L+P DKAFYEAGI  K VGW+NMAF+FLNR+LDL++ IE+G LD +D++D  DTDIP EVPLP  Q++ E +REEV++WVL VSMDQR+EQ L  DER  YEASL +  + V  LPC++TGYP+LRNK+EF + GKAANK++WNKF MA K SHS  CQDVL+F+S WCG   + +FSF
Sbjct:  930 IAEELYTKGDRTKDAIDMYTQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVARTQGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGA-RGVEGFVEQARHWEQAGEYSRAVDCYLKVRD--SGNSGLAEKCWMKAAELSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYKILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAYHSWADLRDVLFNLCENLVKSSEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARLSVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDFQDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTGVRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLPSTSFSF 1748
The following BLAST results are available for this feature:
BLAST of TCONS_00001218-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF1720.000e+054.26Intraflagellar transport protein 172 homolog OS=Ho... [more]
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