TCONS_00001106-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001106-protein
Unique Name	TCONS_00001106-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	541

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001106-protein ID=TCONS_00001106-protein|Name=TCONS_00001106-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MLPKLPLSSIKHTNVNVGNAIIVGANFISSNYRQGFDISIPLFNSLTTRD
PHKHQIKYRQTRSWKIIISQISVDVEHRKTLRHLESSDAGVFMLRKCLND
APEIPNHFEQLCKDGLPFKYPTVLKGGSFCLILRGPYYATTLLLDAMMMG
CIPVIAMDEYIMPFEDVIDWTSASVRIREYQLVSLLQILNRFNEHEIREK
RAKAFYLWKRFFSSIGKIMDGVLDVLHDRVYVSQKRSYEDWNGDTGIFSQ
NLVKPGPSTSMYLPSRSASSGEGFTAVILTYNRMEMCMTLMKQLEKVPSL
KKIIVVWNNPYIDPTANDWPKLRKPWSMVRTKTNRLTNRFYPFEEMETEA
VMAIDDDILMLTVDEIEFGYQTWKEFPDRLVGFPARFHITNPKELINGKR
LQYKYESEWSNSLSMVLTGAAFYHQVYNHWFTHMLPRKTIHYINEKMNCE
DIAMNFLISNLTDKAPIKVTPRKRFTCAQCRRNDSLWSESSHFIKRSECL
SIFTKHFGKMPLRPVEFRADPVLYQENVPLDMMAFPDIGIV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000623	XLOC_000623	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001106	TCONS_00001106	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015338	EXT_C
IPR004263	Exostosin
IPR029044	Nucleotide-diphossugar_trans

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016757	transferase activity, transferring glycosyl groups

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015338	Exostosin , C-terminal	PFAM	PF09258	Glyco_transf_64	coord: 274..524 e-value: 3.6E-82 score: 275.3
IPR004263	Exostosin-like	PFAM	PF03016	Exostosin	coord: 12..191 e-value: 7.1E-29 score: 100.9
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 270..533 e-value: 1.1E-45 score: 155.7
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 274..525

Blast

[Close]

BLAST of TCONS_00001106-protein vs. Swiss-Prot (Human)
Match: EXT2 (Exostosin-2 OS=Homo sapiens GN=EXT2 PE=1 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 2.625e-150
Identity = 223/541 (41.22%), Postives = 340/541 (62.85%), Query Frame = 0

Query:    1 MLPKLPLSSIKHTNVNVGNAIIVGANFISSNYRQGFDISIPLFNSLTTRDPHKHQIKYRQTRSWKIIISQISVDVEHRKTLRHLESSDA-GVFMLRKCLNDAPEIPNHFEQLCKDGLPFKYPTVLKGGSFCLILRGPYYATTLLLDAMMMGCIPVIAMDEYIMPFEDVIDWTSASVRIREYQLVSLLQILNRFNEHEIREKRAKAFYLWKRFFSSIGKIMDGVLDVLHDRVYVSQKRSYEDWNGDTGIFSQNLVKPGPSTSMYLPSRSASSGEGFTAVILTYNRMEMCMTLMKQLEKVPSLKKIIVVWNNPYIDPTAND-WPKLRKPWSMVRTKTNRLTNRFYPFEEMETEAVMAIDDDILMLTVDEIEFGYQTWKEFPDRLVGFPARFHITNPKELINGKRLQYKYESEWSNSLSMVLTGAAFYHQVYNHWFTHMLPRKTIHYINEKMNCEDIAMNFLISNLTDKAPIKVTPRKRFTCAQCRRNDSLWSESSHFIKRSECLSIFTKHFGKMPLRPVEFRADPVLYQENVPLDMMAFPDIG 539
            MLP  P       +V    A++ G  F +  YRQG+D+SIP+++ L+         K    R + ++ SQ+ +  E+R+ L  L+      V +L KC N +  + +   + C     F YP VL+  +FC++LRG      +L D +  GC+PV+  D YI+PF +V+DW  ASV + E ++  +  IL    + +I E + +A + W+ +F SI  I    L +++DR+Y     SYE+WN    +   ++  P     ++LP     S +GFTA++LTY+R+E    ++ ++ KVPSL K++VVWNN   +P  +  WPK+R P  +VRT  N+L+NRF+P++E+ETEAV+AIDDDI+MLT DE++FGY+ W+EFPDRLVG+P R H      L + +  ++KYESEW+N +SMVLTGAAFYH+ +N+ +T+ +P    ++++  MNCEDIAMNFL++N+T KA IKVTPRK+F C +C   D L  + +H ++RSEC++ F   FG MPL+ VE RADPVLY+++ P  + +FP+IG
Sbjct:  191 MLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVYSPLSAEVDLPE--KGPGPRQYFLLSSQVGLHPEYREDLEALQVKHGESVLVLDKCTNLSEGVLS-VRKRCHKHQVFDYPQVLQEATFCVVLRGARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKRASVVVPEEKMSDVYSILQSIPQRQIEEMQRQARWFWEAYFQSIKAIALATLQIINDRIYPYAAISYEEWNDPPAVKWGSVSNP-----LFLPLIPPQS-QGFTAIVLTYDRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEDSLWPKIRVPLKVVRTAENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLH------LWDHEMNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANVTGKAVIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLKVVEHRADPVLYKDDFPEKLKSFPNIG 716

The following BLAST results are available for this feature:

BLAST of TCONS_00001106-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001106-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EXT2	2.625e-150	41.22	Exostosin-2 OS=Homo sapiens GN=EXT2 PE=1 SV=1	[more]

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TCONS_00001106-protein (polypeptide) - C. hemisphaerica