TCONS_00001010-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001010-protein
Unique Name	TCONS_00001010-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	431

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001010-protein ID=TCONS_00001010-protein|Name=TCONS_00001010-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MAAVQHVLLSTEAELLVKALDVSSLEKVGDKRWWNRHDMLEKLNIQSIMN
IPSNSCFITENLLTHGKISLVINELITSEIWSERIFPILYHEMSQKDQST
LPVYMTLFHEATVAGLVESVFYYKEVSEEAGDFLLDLIDYAYRKLTKLIS
KQHCESITQKDPKNDLLKQNEDIQFTIAMKCISIIKYICDAMDSITLSAI
TRILNTHDFPYLLSQLIDLAPWKKRKENGEVEIFTDNKWVIVPKDETHLL
PKIEGQVWLTLYQLLLHPEAQRKYEYNSHRKTQLLKLRRYLHELLLDQLP
YLSEVQRFLENLSVMDPPPSKQDLIIEQIPEVRNKLERMYEGRWNKIAKT
QLQQNFTMSSKDMKEHAQRLAATYDLDILESLIDEAPTCSNCQNEATKRC
SRCQNEWYCSRPCQVKHWSKHKELCNILSAK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000584	XLOC_000584	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001010	TCONS_00001010	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002893	Znf_MYND

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 389..425 e-value: 9.4E-10 score: 38.3
IPR002893	Zinc finger, MYND-type	PROSITE	PS01360	ZF_MYND_1	coord: 389..425
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 389..425 score: 12.164
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 386..428

Blast

[Close]

BLAST of TCONS_00001010-protein vs. Swiss-Prot (Human)
Match: ZMY10 (Zinc finger MYND domain-containing protein 10 OS=Homo sapiens GN=ZMYND10 PE=1 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 5.389e-134
Identity = 195/432 (45.14%), Postives = 292/432 (67.59%), Query Frame = 0

Query:    7 VLLSTEAELLVKALDVSSLEKVGDKRWWNRHDMLEKLNIQSIMNIP-SNSCFITENLLTHGKISLVINELITSEIWSERIFPILYHEMSQKDQSTLPVYMTLFHEATVAGLVESVFYYKEVSEEAGDFLLDLIDYAYRKLTKLISKQHCESITQ------KDPKNDLLKQNEDIQFTIAMKCISIIKYICDAMDSITLSAITRILNTHDFPYLLSQLIDLAPWKKRKENGEVEIFTDNKWVIVPKDETHLLPKIEGQVWLTLYQLLLHPEAQRKYEYNSHRKTQLLKLRRYLHELLLDQLPYLSEVQRFLENLSVMDPPPSKQDLIIEQIPEVRNKLERMYEGRWNKIAKTQLQQNFTMSSKDMKEHAQRLAATYDLDILESLIDEAPTCSNCQNEATKRCSRCQNEWYCSRPCQVKHWSKHKELCNILSAK 431
            +LL  EAE+LV+ L    L ++G + W  +H+ LEKLN+Q+I++   S    I E L+THGK+  ++ ELI  E+W +++FP+       K Q+T P+YM + HEA++  L+E+VF++KEV E A D +LDL+DY +RKLT L+++  C    +       +P  +L KQ E ++F IA+K +S+++YI D +DS++LS ++R+L+TH+ P LL +L++ +PW +R E G+++ F  ++W  V   E   L K++GQVW+ LY LLL PEAQ +Y   S  K +LLKLR +L + LLDQLP L+ +Q FL +L++ +  P K+DL++EQIPE+  +LER   G+W  IAK QLQ  F+ S +D++  A+R A TY LD+LE++  E P C+ C  EA+KRCSRCQNEWYC R CQVKHW KH + C +L+A+
Sbjct:    6 LLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQELLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELMEFEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRR-EGGKLQQFEGSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTLLDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC-VLAAQ 435

The following BLAST results are available for this feature:

BLAST of TCONS_00001010-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001010-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZMY10	5.389e-134	45.14	Zinc finger MYND domain-containing protein 10 OS=H...	[more]

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TCONS_00001010-protein (polypeptide) - C. hemisphaerica