TCONS_00000932-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000932-protein
Unique NameTCONS_00000932-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000932-protein ID=TCONS_00000932-protein|Name=TCONS_00000932-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
GEAAYNKADVIINIVTALRKRAEVIDFSHHFIESAFGILRVAKYNKEFPN
WKFLKPLSISLEIALLVTTGLALFIISVIEKSAANMRRKPSIFFPEIMAY
VFGLMFQRDMGGMNPRIWSGRIVALGYASAMTIIMSIYTARITANSIGHV
VIEDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000557XLOC_000557Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000932TCONS_00000932Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 58..147
e-value: 9.9E-11
score: 40.8
NoneNo IPR availableGENE3D3.40.190.10coord: 1..57
e-value: 1.3E-5
score: 24.1
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 5..72
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 63..144
e-value: 3.3E-8
score: 33.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000932-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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