TCONS_00000833-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000833-protein
Unique NameTCONS_00000833-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000833-protein ID=TCONS_00000833-protein|Name=TCONS_00000833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
NYACKFYISTIFSHRFYIKVLVHYFPMKSHHCKLFVASCKFEETEVKVFD
LNHIQMAETKQGLIILAQKIISNDKSNQTGEMVYRVQWYDSIIPESNLRK
MFPDLLKEYESKQKVKPNQKEGGGTKSHHKESQKHTTLIPSSPKKILHKT
YSQELSAKEVLAKKLIQKQKNASGTDAFHCDFCEKKFKTSIDLKCHIYIH
QFANDRIKVTKPGVREGPSIAPVKSNKSKRKPTRKYTPLEKTKCDICGKE
VTSKRLESHKITYHLKNGKFPCSECEKRFQCNRDLQRHAEIHKDGKLEKT
SCDICGKILTKRHLENHKNRFHSQGEYTCKKCNKIFKHLLDLDWHLKKPC
TETPNAEETSTRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000500XLOC_000500Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000833TCONS_00000833Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 327..347
e-value: 17.0
score: 11.3
coord: 270..292
e-value: 0.087
score: 21.9
coord: 242..264
e-value: 12.0
score: 12.7
coord: 300..322
e-value: 27.0
score: 9.4
coord: 178..200
e-value: 0.084
score: 22.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 180..200
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 272..292
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 178..200
score: 9.473
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 270..297
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 327..354
score: 9.265
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 164..200
coord: 237..249
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 301..347
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 242..294
NoneNo IPR availableGENE3D3.30.160.60coord: 283..312
e-value: 6.8E-7
score: 29.1
NoneNo IPR availableGENE3D3.30.160.60coord: 333..347
e-value: 0.33
score: 10.7
NoneNo IPR availableGENE3D2.20.28.10coord: 187..253
e-value: 8.7E-7
score: 28.6
NoneNo IPR availableGENE3D3.30.160.60coord: 127..186
e-value: 0.0033
score: 17.3
NoneNo IPR availableGENE3D2.20.28.10coord: 313..332
e-value: 0.015
score: 14.6
NoneNo IPR availableGENE3D2.20.28.30coord: 254..282
e-value: 1.8E-8
score: 34.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..143

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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