TCONS_00000783-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000783-protein
Unique NameTCONS_00000783-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000783-protein ID=TCONS_00000783-protein|Name=TCONS_00000783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MNLEQCLQKIKWHIVERGTFATLKSPFSINLEDIPPLIPPKQRKHEYNTE
SQKRSIYLKENDSVEGDVNVLSNLMEEKGLTIDQIEKMPNNELLETAKAC
SIPTQSKSQDMLRLDILKLYSSILVGKSSCHKFVKSPGHTGGFYHVVCAH
GTTVCSKFMVLTESVRDAADLYLSLNHPPVLFVCDTPCTFAQHISKRCPE
LAKEYWGEMNGCFEKPVFDKEPSNGMDVPELVPPEFRSGEGSKGLPGENL
GSWHPLTGKSRRYVCGDRFHNKKDPHVSPLCRYHDIDLCAQSKTVKTSYQ
ESLNNKKNTLRNRSSCNQTIMIHIYYNFLMNFYENEKIVKRQMKELRKSY
GGKDLKRDKFMRFVCAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000482XLOC_000482Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000783TCONS_00000783Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00000783-protein vs. Swiss-Prot (Human)
Match: HMGX3 (HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.398e-28
Identity = 101/371 (27.22%), Postives = 156/371 (42.05%), Query Frame = 0 
Query:    1 MNLEQCLQKIKWHIVERGTFATLKSPFSINLEDIPPLIPPKQRKHEY-NTESQKRSIYLKENDSVEGDVNVLSNLMEEKGLTIDQIEKMPNNELLETAKACSIPTQSK-SQDMLRLDILKLYSSILVGKSSCHKFVKSPGH-TGGFYHVVCAHGTTVCSKFMVLTESVRDAADLYLSLNHPPVLFVCDTPCTFAQHISKRCPELAKEYWGEMNGCFEKPVFDKEPSNGMDVPELVPPEFRSGEGSKGLPGENLGSWHPLT-GKSRRYVCGDRFHNKKDPHVSPLCRYHDIDLCAQSKTVKTSYQESLNNKKNTLRNRSSCNQTIMIHIYYNFLMNFYENEKIVKRQMKELRKS-YGGKDLKRDKFMRFVCA 366
            +N+E     ++  ++E+  F         +   I P  PP  R     NTE  K      +   V G  + L  L++E    +D+I      +L    + C IP  ++ S+D L   +L LY S+  G     + ++ P H TGG  + VC H     SK++V  ES RD  DL  S  H P ++V D   + A       PEL  + WG   GCF  P    EP   +  PEL+   +     +  +        HP+T   +RR V      N  DP       +H + LC +     T     +++K N +R R         +  YN LM+F  + +IV RQ+ ++ +S   G+ + RD   R   A
Sbjct: 1168 VNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKN----LDVQPVPGSGSALVRLLQEGTCKLDEIGSYSEEKLQHLLRQCGIPFGAEDSKDQLCFSLLALYESVQNGA----RAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPT---EPPVSVSCPELLDQHY-----TVDMTETEHSIQHPVTKTATRRIVHAGLQPNPGDPSAG----HHSLALCPELAPYATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQSCQPGEVVIRDTLYRLGVA 1518
The following BLAST results are available for this feature:
BLAST of TCONS_00000783-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGX31.398e-2827.22HMG domain-containing protein 3 OS=Homo sapiens GN... [more]
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