TCONS_00000722-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000722-protein
Unique Name	TCONS_00000722-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	393

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000722-protein ID=TCONS_00000722-protein|Name=TCONS_00000722-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
LDIQPCVGVYKITPSEVNSRPAACLTMFLLQGRTVMLEQPRKSGAKILTH
MLNSHGGDIYIHVLAAGRSSLEDPPSITEGVGGRVTDYRVNDFGRLMKEN
RLAPFTDIPDGQTPNKTASSRLERYTKHWPMVICDTLIFNMQQNLEPLLS
LLMKPSLSEEDVQECKKVVYKLQAMEARNDSLPLPVVTLNGKNSKKEDQY
KHVWTELDVYVEGASKTSPMHKKVLDCLRGTQDPPLPPPPDMKPPEEPKA
VPSTDKNRAEAPSERKAKEVPSDPRRRRRTSESSSTTNQKDSSQAAPITP
KKSPRHDEPASKLRKTGSRSALNTITPVVKAKSSLLSIWTNHLNLTASRY
HEEFFGRKVSGNRKFDLYAADADPTGHNDSKSYGSKGSSKGEW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000455	XLOC_000455	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000722	TCONS_00000722	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019355	Cell_cycle_regulator_Mat89Bb

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019355	Cell cycle regulator Mat89Bb	PFAM	PF10221	DUF2151	coord: 2..369 e-value: 1.1E-103 score: 348.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..393

Blast

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BLAST of TCONS_00000722-protein vs. Swiss-Prot (Human)
Match: INT13 (Integrator complex subunit 13 OS=Homo sapiens GN=INTS13 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 1.832e-93
Identity = 161/383 (42.04%), Postives = 229/383 (59.79%), Query Frame = 0

Query:    1 LDIQPCVGVYKITPSEVNSRPAACLTMFLLQGRTVMLEQPRKSGAKILTHMLNSHGGDIYIHVLAAGRSSLEDPPSITEGVGGRVTDYRVNDFGRLMKENRLAPFTD---IPDG--QTPNKTASSRLERYTKHWPMVICDTLIFNMQQNLEPLLSLLMKPSLSEEDVQECKKVVYKLQAMEARNDSLPLPVVTLNGKNSKKEDQYKHVWTELDVYVEGASKTSPMHKKVLDCLRGTQDPPLPPPPDMKPPEEPKAVPSTDKNRAEAPSERKAKEVPSDPRRRRRTSESSSTTNQKDSSQAAPITPKKSPRHDEPASKLRKTGSRSALNTITPVVKAKS--SLLSIWTNHLNLTASRYHEEFFGRKVSGNRKFDLYAADADPTG 376
            +++  C G Y+I+P +VNSRP++CLT FLL GR+V+LEQPRKSG+K+++HML+SHGG+I++HVL++ RS LEDPPSI+EG GGRVTDYR+ DFG  M+ENRL PF D     DG  + P + A  +LE++T++WPM+I  T IFNMQ  + PL S+++K SL+EEDV  C+K +Y L  ME +ND LP+  V   GK  K+++QY+ +W EL+  V      S  H++VL+CL   +  P        P EE +      +   E  SE+  K+   +   +            K+    A I  K SP   EP +K         ++    V K+K   SLLS+W+N +N   SR H+EF GR  S N + +LY    +  G
Sbjct:  326 IELHYCTGAYRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQLEKHTRYWPMIISQTTIFNMQA-VVPLASVIVKESLTEEDVLNCQKTIYNLVDMERKNDPLPISTVGTRGKGPKRDEQYRIMWNELETLVRAHINNSEKHQRVLECLMACRSKP--------PEEEERKKRGRKREDKEDKSEKAVKDYEQEKSWQDSERLKGILERGKEELAEAEII-KDSPDSPEPPNK----KPLVEMDETPQVEKSKGPVSLLSLWSNRINTANSRKHQEFAGRLNSVNNRAELYQHLKEENG 694

The following BLAST results are available for this feature:

BLAST of TCONS_00000722-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000722-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
INT13	1.832e-93	42.04	Integrator complex subunit 13 OS=Homo sapiens GN=I...	[more]

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TCONS_00000722-protein (polypeptide) - C. hemisphaerica