TCONS_00000713-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000713-protein
Unique NameTCONS_00000713-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1280

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000713-protein ID=TCONS_00000713-protein|Name=TCONS_00000713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1280bp
MENLSFTFNQNSKSSDENEPAFRHTLDLDQLNKDEYCEIDYLQILRKSRK
DSSEETSESLDGIPEQFLKYTSEKYVDGYGYEDDDGFIDNSEAYDENVPV
DWTTKHGGFYINQGELDFTKSKKPSKATIKRKLVAVKNDKLSKMGKQSKT
PKKKVLINQEKNRKRHETLLKAQKILNKKKAKTSATSTTTSAVTKAPKDA
NKSFEDDLPLAKLASKSSSSSSSKDEDENNDNVPLSKILDKQKSSTSESG
EGNSKPVPNKDVPQPPKVPPPLPTNLSEEDRKLIEELKKLAEACIKGKFF
TPEINQVLLRFAKMCKMFSPKDRNAVYDHVTIFTPCARDTLLKRCRALLL
QNQRDLEDGPIKKLKEEVAKAMTLQKAGYDAEVAKALQDQAREQIQQSSK
DETKQENGPNAEEKAKKSMPKRKFNWSDELRKLLCEVVHNRVSLFKISKS
RYMTGEEYIKDFLENEIRKIWPKGWMTSRILYKESRQGHLEITQNKTKTV
KVDKKQGGALTAPSSTTTTITTTSKVAPKSITAASVSVKLPAKTTSTTAT
GTKASTAVLSLTKPNTTSKVIITGIKNITVPTSSVLKANSSNQKVTLKAS
TVNDANKASSSIFTITSPSSQTKPSTANTSKTITVPPLRKLPASSKSAAT
SNVLTTKHSKEKIQYSSPIYHQPEPRNHIDSPEQQTTVIFTRTISNSKPT
LVSSSLPATSSQNDNNIPRSTPTKIFSKPQTIFSNAKPSSSVMSHSRQEV
FSRPKNHINIDEKIISVARGLKDNKSVYDEGIKVQRTEFRQDALQRNSNS
KQESLPQTLIHKEPASRNSSSSTSSQRNIFNQRSPTPDVVTPKSTTNQGV
TQRTIILGGQKEEIRSKQGRTNLHQELSPQKSLMHFENHPRNQLETAQKS
RLSSEPQQQVTINKTTTHHQSTTHSVSPQQQSTRVRVSPQHPSAALKASP
QQQSSITKLSPQHPAAMLKTSQQQHQPRQQRANDTPLQHPRNAVPHRAAM
TSPHKQQQASMSSFEQQQHQKLLQYKRMALTKEQFREASQQQSSATSLKE
SQQRIPTSPQKSSQSLIHQDMSPRTVVNHKAPQRMTVTQAGPQRTLAHHE
VIQRQPTSQHISHRTTKMQHKPLEHYSSQMLAKVSSSSYMSDDGHSPINN
QRSSWMTVDEQKRQQLLQSGHSRSKAIPNPPSRYDNSSHLSHQQTNNLHA
YHQQPQKSSIKNTSMDFNDIVPFSAESHTTSGQNPSPFNPHAFHPNFSPS
LADIKPSLFSFPSTSKEGGTNNNNTRENHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000449XLOC_000449Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000713TCONS_00000713Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026947UBN_middle_dom
IPR014840HRD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026947Ubinuclein middle domainPFAMPF14075UBN_ABcoord: 272..483
e-value: 1.8E-52
score: 178.1
IPR014840Hpc2-related domainPFAMPF08729HUNcoord: 73..117
e-value: 1.7E-11
score: 43.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1225..1280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 701..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1034..1068
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1159..1193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 892..1020
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..872

Blast
[Close]
BLAST of TCONS_00000713-protein vs. Swiss-Prot (Human)
Match: UBN2 (Ubinuclein-2 OS=Homo sapiens GN=UBN2 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 3.770e-38
Identity = 86/242 (35.54%), Postives = 135/242 (55.79%), Query Frame = 0 
Query:  266 PKVPPPLPTNLSEEDRKLIEELK---KLAEACIKGKFFTPEINQVLLRFAKMCKMFSPKDRNAVYDHVTIFTPCARDTLLKRCRALLLQNQRDLEDGPIKKLKEEVAKAMTLQKAGYDAEVAKALQDQAREQIQQSS--KDETKQENGP--NAEEKAKKSM--PKRKFNWSDELRKLLCEVVHNRVSLFKISKSRYMTGEEYIKDFLENEIRKIWPKGWMTSRILYKESRQGHLEITQNKTK 498
            PKV P LP  L     K IE+L+   KL +   + KFFT ++N +LL      +   P  R+ VY H+  F PC ++TL+KR + L L  Q D    P++KLK  V+  M  Q   Y  +       QAR Q + +    DE +++NG   + +EK  K +  P++KF+W D +R LLC +V  ++  +++  ++  + E+Y+K F+E E++ +WPKGWM +R+L+KESR  H  +T    K
Sbjct:  442 PKVVPTLPEGLPVLLEKRIEDLRVAAKLFDEEGRKKFFTQDMNNILLDIELQLQELGPVIRSGVYSHLEAFVPCNKETLVKRLKKLHLNVQDDRLREPLQKLKLAVSNVMPEQLFKYQEDC------QARSQAKCAKLQTDEEREKNGSEEDDDEKPGKRVIGPRKKFHWDDTIRTLLCNLVEIKLGCYELEPNKSQSAEDYLKSFMETEVKPLWPKGWMQARMLFKESRSVHNHLTSAPAK 677
The following BLAST results are available for this feature:
BLAST of TCONS_00000713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBN23.770e-3835.54Ubinuclein-2 OS=Homo sapiens GN=UBN2 PE=1 SV=2[more]
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